About: Genome analysis with the conditional multinomial distribution profile

Facets (new session)
Description
Metadata
Settings
- owl:sameAs
- Inference Rule:

About: Genome analysis with the conditional multinomial distribution profile Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Genome analysis with the conditional multinomial distribution profile
Creator	Chang, Guisong Wang, Tianming
Source	Elsevier; Medline; PMC
abstract	Abstract The focus of the research is on the analysis of genome sequences. Based on the inter-nucleotide distance sequence, we propose the conditional multinomial distribution profile for the complete genomic sequence. These profiles can be used to define a very simple, computationally efficient, alignment-free, distance measure that reflects the evolutionary relationships between genomic sequences. We use this distance measure to classify chromosomes according to species of origin, to build the phylogenetic tree of 24 complete genome sequences of coronaviruses. Our results demonstrate the new method is powerful and efficient.
has issue date	2011-02-21(xsd:dateTime)
bibo:doi	10.1016/j.jtbi.2010.11.034
bibo:pmid	21129383
has license	els-covid
sha1sum (hex)	07e18fb2ba3bac9456e8afb29735fb91679840f9
schema:url	https://doi.org/10.1016/j.jtbi.2010.11.034
resource representing a document's title	Genome analysis with the conditional multinomial distribution profile
has PubMed Central identifier	PMC7094119
has PubMed identifier	21129383
schema:publication	Journal of Theoretical Biology
resource representing a document's body	covid:07e18fb2ba3bac9456e8afb29735fb91679840f9#body_text
is schema:about of	named entity 'define' named entity 'profile' named entity 'MULTINOMIAL DISTRIBUTION' named entity 'EFFICIENT' named entity 'SPECIES OF ORIGIN' named entity 'SEQUENCES' named entity 'USED' named entity 'RELATIONSHIPS' named entity 'CONDITIONAL' named entity 'GENOMIC SEQUENCE' covid:arg/07e18fb2ba3bac9456e8afb29735fb91679840f9 named entity 'METHOD' named entity 'POWERFUL' named entity 'PHYLOGENETIC TREE' named entity 'GENOME ANALYSIS' named entity 'PROFILE' named entity 'USE' named entity 'CONDITIONAL' named entity 'RESEARCH' named entity 'BASED' named entity 'GENOMIC' named entity 'CHROMOSOMES' named entity 'REFLECTS' named entity 'CORONAVIRUSES' named entity 'ACCORDING' named entity 'MULTINOMIAL DISTRIBUTION' named entity 'RESULTS' named entity 'INTER-' named entity 'PROFILE' named entity 'FOCUS' named entity 'ANALYSIS' named entity 'SIMPLE' named entity 'DISTANCE' named entity 'NUCLEOTIDE' named entity 'DISTANCE MEASURE' named entity 'THESE' named entity 'BUILD' named entity 'ALIGNMENT' named entity 'GENOME' named entity 'FREE' named entity 'NEW' named entity 'CLASSIFY' named entity 'COMPLETE' named entity 'OUR' named entity 'SEQUENCE' named entity 'demonstrate' named entity 'sequence' named entity 'distance measure' named entity 'efficient' named entity 'efficient' named entity 'phylogenetic tree' named entity 'coronaviruses' named entity 'sequences' named entity 'Genome' named entity 'multinomial distribution' named entity 'multinomial distribution' named entity 'Genome analysis' named entity 'nucleotide' named entity 'DNA sequence' named entity 'DNA sequence' named entity 'genome sequence' named entity 'multinomial distribution' named entity 'Robinson-Foulds' named entity 'nucleotide' named entity 'C. elegans' named entity 'Euclidean distance' named entity 'nucleotide' named entity 'sequence analysis' named entity 'chromosomes' named entity 'genomic data' named entity 'nucleotide' named entity 'PHYLIP' named entity 'genomes' named entity 'phylogenetic tree' named entity 'multinomial distribution' named entity 'DNA sequence' named entity 'gene' named entity 'nucleotide' named entity 'multinomial distribution' named entity 'nucleotide'

Faceted Search & Find service v1.13.91 as of Mar 24 2020

Alternative Linked Data Documents: Sponger | ODE Content Formats:

RDF

ODATA

Microdata

About

OpenLink Virtuoso version 07.20.3229 as of Jul 10 2020, on Linux (x86_64-pc-linux-gnu), Single-Server Edition (94 GB total memory)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2024 OpenLink Software