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About:
Chicken GRIFIN: Structural characterization in crystals and in solution
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An Entity of Type :
schema:ScholarlyArticle
, within Data Space :
wasabi.inria.fr
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Type:
Academic Article
research paper
schema:ScholarlyArticle
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type
Academic Article
research paper
schema:ScholarlyArticle
isDefinedBy
Covid-on-the-Web dataset
has title
Chicken GRIFIN: Structural characterization in crystals and in solution
Creator
Gabius, Hans-Joachim
Kaltner, Herbert
Romero, Antonio
Gilles, Ulrich
Lindner, Ingo
Ludwig, Anna-Kristin
Reusch, Dietmar
Sehad, Celia
Caballero, Gabriel
Roy, Ren
Ruiz, Federico
Shiao, Tze
Source
Elsevier; Medline; PMC
abstract
Abstract Despite its natural abundance in lenses of vertebrates the physiological function(s) of the galectin-related inter-fiber protein (GRIFIN) is (are) still unclear. The same holds true for the significance of the unique interspecies (fish/birds vs mammals) variability in the capacity to bind lactose. In solution, ultracentrifugation and small angle X-ray scattering (at concentrations up to 9 mg/mL) characterize the protein as compact and stable homodimer without evidence for aggregation. The crystal structure of chicken (C-)GRIFIN at seven pH values from 4.2 to 8.5 is reported, revealing compelling stability. Binding of lactose despite the Arg71Val deviation from the sequence signature of galectins matched the otherwise canonical contact pattern with thermodynamics of an enthalpically driven process. Upon lactose accommodation, the side chain of Arg50 is shifted for hydrogen bonding to the 3-hydroxyl of glucose. No evidence for a further ligand-dependent structural alteration was obtained in solution by measuring hydrogen/deuterium exchange mass spectrometrically in peptic fingerprints. The introduction of the Asn48Lys mutation, characteristic for mammalian GRIFINs that have lost lectin activity, lets labeled C-GRIFIN maintain capacity to stain tissue sections. Binding is no longer inhibitable by lactose, as seen for the wild-type protein. These results establish the basis for detailed structure-activity considerations and are a step to complete the structural description of all seven members of the galectin network in chicken.
has issue date
2018-03-31
(
xsd:dateTime
)
bibo:doi
10.1016/j.biochi.2017.12.003
bibo:pmid
29248541
has license
els-covid
sha1sum (hex)
1141c480cc6ab01d00721ee772ea39d4b74eb615
schema:url
https://doi.org/10.1016/j.biochi.2017.12.003
resource representing a document's title
Chicken GRIFIN: Structural characterization in crystals and in solution
has PubMed Central identifier
PMC7115793
has PubMed identifier
29248541
schema:publication
Biochimie
resource representing a document's body
covid:1141c480cc6ab01d00721ee772ea39d4b74eb615#body_text
is
schema:about
of
named entity 'mass'
named entity 'canonical'
named entity 'maintain'
named entity 'activity'
named entity 'sequence'
named entity 'stain'
named entity 'HYDROXYL '
named entity 'ITS'
named entity 'DETAILED'
named entity 'INTRODUCTION'
named entity 'OBTAINED'
named entity 'LIGAND'
named entity '4.2'
named entity 'LETS'
named entity 'PROTEIN'
named entity 'MEMBERS'
named entity 'COMPLETE'
named entity 'VERTEBRATES'
named entity 'NATURAL'
named entity 'SEEN'
named entity 'RESULTS'
named entity 'SOLUTION'
named entity 'HAVE'
named entity 'REPORTED'
named entity 'STRUCTURAL ALTERATION'
named entity 'ABUNDANCE'
named entity 'MEASURING'
named entity 'LACTOSE'
named entity 'HYDROGEN'
named entity 'CHICKEN'
named entity 'GLUCOSE'
named entity 'SIGNATURE'
named entity 'GALECTINS'
named entity 'DEPENDENT'
named entity '28S'
named entity 'VARIABILITY'
named entity 'SIGNIFICANCE'
named entity 'HOMODIMER'
named entity 'NETWORK'
named entity 'UP TO'
named entity 'STRUCTURAL CHARACTERIZATION'
named entity 'GRIFIN'
named entity 'CRYSTALS'
named entity 'UNCLEAR'
named entity 'AGGREGATION'
named entity 'MAMMALS'
named entity 'CONSIDERATIONS'
named entity 'THERMODYNAMICS'
named entity 'BASIS'
named entity 'STABLE'
named entity 'MAMMALIAN'
named entity 'EXCHANGE'
named entity 'GALECTIN-RELATED INTER-FIBER PROTEIN'
named entity 'STAIN TISSUE'
named entity 'HYDROGEN BONDING'
named entity 'BIND'
named entity 'BINDING'
named entity 'NO EVIDENCE FOR'
named entity 'TRUE'
named entity 'CRYSTAL STRUCTURE'
named entity 'ACTIVITY'
named entity 'WILD-TYPE'
named entity 'LECTIN ACTIVITY'
named entity 'SEQUENCE'
named entity 'COMPACT'
named entity 'PROTEIN '
named entity 'SEVEN'
named entity 'MG%'
named entity 'MUTATION'
named entity 'STABILITY'
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