About: Identification of a Lineage D Betacoronavirus in Cave Nectar Bats (Eonycteris spelaea) in Singapore and an Overview of Lineage D Reservoir Ecology in SE Asian Bats

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About: Identification of a Lineage D Betacoronavirus in Cave Nectar Bats (Eonycteris spelaea) in Singapore and an Overview of Lineage D Reservoir Ecology in SE Asian Bats Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
title	Identification of a Lineage D Betacoronavirus in Cave Nectar Bats (Eonycteris spelaea) in Singapore and an Overview of Lineage D Reservoir Ecology in SE Asian Bats
Creator	Lee, Y.-H Smith, G Wang, L.-F Su, Y Borthwick, S Gunalan, V Han, H Jayakumar, J Liang, B Linster, M Low, D Maurer-Stroh, S Mendenhall, I Neves, E Okahara, K Skiles, M
source	Medline; PMC
abstract	Coronaviruses are a diverse group of viruses that infect mammals and birds. Bats are reservoirs for several different coronaviruses in the Alphacoronavirus and Betacoronavirus genera. They also appear to be the natural reservoir for the ancestral viruses that generated the severe acute respiratory syndrome coronavirus and Middle East respiratory syndrome coronavirus outbreaks. Here, we detected coronavirus sequences in next‐generation sequence data created from Eonycteris spelaea faeces and urine. We also screened by PCR urine samples, faecal samples and rectal swabs collected from six species of bats in Singapore between 2011 and 2014, all of which were negative. The phylogenetic analysis indicates this novel strain is most closely related to lineage D Betacoronaviruses detected in a diverse range of bat species. This is the second time that coronaviruses have been detected in cave nectar bats, but the first coronavirus sequence data generated from this species. Bat species from which this group of coronaviruses has been detected are widely distributed across SE Asia, South Asia and Southern China. They overlap geographically, often share roosting sites and have been witnessed to forage on the same plant. The addition of sequence data from this group of viruses will allow us to better understand coronavirus evolution and host specificity.
has issue date	2016-09-16(xsd:dateTime)
bibo:doi	10.1111/tbed.12568
bibo:pmid	27637887
has license	no-cc
sha1sum (hex)	23b817f998bc37a652a4fee6dceb33c835e76e74
schema:url	https://doi.org/10.1111/tbed.12568
resource representing a document's title	Identification of a Lineage D Betacoronavirus in Cave Nectar Bats (Eonycteris spelaea) in Singapore and an Overview of Lineage D Reservoir Ecology in SE Asian Bats
has PubMed Central identifier	PMC7159162
has PubMed identifier	27637887
schema:publication	Transbound Emerg Dis
resource representing a document's body	covid:23b817f998bc37a652a4fee6dceb33c835e76e74#body_text
is schema:about of	named entity 'addition' named entity 'group' named entity 'data' named entity 'coronaviruses' named entity 'severe acute respiratory syndrome coronavirus' named entity 'species' named entity 'geographically' named entity 'rectal' named entity 'Bats' named entity 'RECTAL' named entity 'SOUTH ASIA' named entity 'CHINA' named entity 'ADDITION' named entity 'UNDERSTAND' named entity 'NOVEL' named entity 'IDENTIFICATION' named entity 'urine' named entity 'Eonycteris' named entity 'bats' named entity 'samples' named entity 'species' named entity 'South Asia' named entity '2011' named entity 'Nectar' named entity 'Alphacoronavirus' named entity 'coronaviruses' named entity 'viruses' named entity 'urine' named entity 'urine' named entity 'evolution' named entity 'Bat species' named entity 'Southern China' named entity 'viruses' named entity 'Betacoronavirus' named entity 'Eonycteris spelaea' named entity 'Betacoronavirus' named entity 'infect' named entity 'systemic infections' named entity 'bead' named entity 'Heidelberg' named entity 'SE Asia' named entity 'Singapore' named entity 'rabies' named entity 'Agencourt' named entity 'bat species' named entity 'Australia' named entity 'bat species' named entity 'gene' named entity 'MERS' named entity 'Malaysia' named entity 'RdRp' named entity 'coronavirus' named entity 'phylogenetic analysis' named entity 'seropositive' named entity 'Gammacoronavirus' named entity 'Betacoronaviruses' named entity 'coronaviruses' named entity 'virus' named entity 'coronaviruses' named entity 'betacoronaviruses' named entity 'Bangladesh' named entity 'faeces' named entity 'Rhinolophus lepidus' named entity 'tropics' named entity 'National Parks Board' named entity 'RdRp'

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