About: A 2D graphical representation of the sequences of DNA based on triplets and its application

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An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
title	A 2D graphical representation of the sequences of DNA based on triplets and its application
Creator	Wang, Lei Wang, Junfeng Zou, Sai
source	PMC
abstract	In this paper, we first present a new concept of ‘weight’ for 64 triplets and define a different weight for each kind of triplet. Then, we give a novel 2D graphical representation for DNA sequences, which can transform a DNA sequence into a plot set to facilitate quantitative comparisons of DNA sequences. Thereafter, associating with a newly designed measure of similarity, we introduce a novel approach to make similarities/dissimilarities analysis of DNA sequences. Finally, the applications in similarities/dissimilarities analysis of the complete coding sequences of β-globin genes of 11 species illustrate the utilities of our newly proposed method.
has issue date	2014-01-02(xsd:dateTime)
bibo:doi	10.1186/1687-4153-2014-1
bibo:pmid	24383852
has license	cc-by
sha1sum (hex)	5bc5b2f9dee2ff454efe226384070d467112e25d
schema:url	https://doi.org/10.1186/1687-4153-2014-1
resource representing a document's title	A 2D graphical representation of the sequences of DNA based on triplets and its application
has PubMed Central identifier	PMC3896961
has PubMed identifier	24383852
schema:publication	EURASIP J Bioinform Syst Biol
resource representing a document's body	covid:5bc5b2f9dee2ff454efe226384070d467112e25d#body_text
is schema:about of	named entity 'sequences' named entity 'SET' named entity 'GLOBIN GENES' named entity 'MEASURE' named entity 'SEQUENCES' named entity 'PAPER' named entity 'TRIPLETS' named entity 'TRIPLET' named entity 'SPECIES' named entity 'A DNA' named entity 'NEW' named entity 'KIND' named entity 'TRANSFORM' named entity 'PLOT' named entity 'SIMILARITY' named entity 'NOVEL' named entity 'APPLICATIONS' named entity 'APPROACH' named entity 'DIFFERENT' named entity 'SEQUENCES' named entity 'DNA' named entity 'ITS' named entity 'ANALYSIS' named entity 'APPLICATION' named entity 'TRIPLETS' named entity 'REPRESENTATION' named entity 'PRESENT' named entity 'INTRODUCE' named entity 'NEWLY' named entity 'REPRESENTATION' named entity 'MAKE' named entity 'WEIGHT' named entity 'ASSOCIATING' named entity 'BASED' named entity 'DNA SEQUENCE' named entity 'UTILITIES' named entity 'OUR' named entity 'CODING' named entity 'QUANTITATIVE' named entity 'DNA SEQUENCES' named entity 'COMPLETE' named entity 'CONCEPT' named entity 'complete' named entity 'sequences' named entity 'coding sequences' named entity 'DNA sequence' named entity 'sequence data' named entity 'DNA sequences' named entity 'similarity matrix' named entity 'coding sequences' named entity 'amino acids' named entity 'molecular biologists' named entity 'chimpanzee' named entity 'codon' named entity 'coding sequences' named entity '3D graphical representation' named entity 'computationally expensive' named entity 'protein synthesis' named entity 'codons' named entity 'matrices' named entity 'DNA sequences' named entity 'Liao' named entity 'Codon' named entity 'DNA sequences' named entity 'mammals' named entity 'matrices' named entity 'codons' named entity 'coding sequences' named entity 'coding sequences' named entity 'amino acids' named entity 'matrix computation' named entity 'DNA sequences' named entity 'analysis of DNA' named entity 'DNA sequences' named entity 'amino acid' named entity 'genetic code' named entity 'β-globin' named entity 'DNA sequence data' named entity 'analysis of DNA'

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