About: Detection of influenza C viruses among outpatients and patients hospitalized for severe acute respiratory infection, Minnesota, 2013

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About: Detection of influenza C viruses among outpatients and patients hospitalized for severe acute respiratory infection, Minnesota, 2013–2016 Goto Sponge NotDistinct Permalink

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type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Detection of influenza C viruses among outpatients and patients hospitalized for severe acute respiratory infection, Minnesota, 2013–2016
Creator	Como-Sabetti, Kathryn Friedlander, Hannah Shu, Bo Lindstrom, Stephen Fowlkes, Ashley Steffens, Andrea Martin, Karen Lynfield, Ruth Lynch, Brian Bistodeau, Sarah Boxrud, David Bye, Erica Chaves, Sandra Strain, Anna Thielen, Beth
Source	Medline; PMC
abstract	BACKGROUND: Existing literature suggests that influenza C typically causes mild respiratory tract disease. However, clinical and epidemiological data are limited. METHODS: Four outpatient clinics and three hospitals submitted clinical data and respiratory specimens through a surveillance network for acute respiratory infection (ARI) during May 2013 through December 2016. Specimens were tested using multi-target nucleic acid amplification tests (NAAT) for 19–22 respiratory pathogens, including influenza C. RESULTS: Influenza C virus was detected among 59 of 10,202 (0.58%) hospitalized SARI cases and 11 of 2,282 (0.48%) outpatients. Most detections occurred from December to March, with 73% during the 2014–2015 season. Influenza C detections occurred among patients of all ages, with similar rates between inpatients and outpatients. The highest rate of detection occurred among children aged 6 to 24 months (1.2%). Among hospitalized cases, seven required intensive care. Medical co-morbidities were reported in 58% of hospitalized cases and all who required intensive care. At least one other respiratory pathogen was detected in 40 (66%) cases, most commonly rhinovirus/enterovirus (25%) and respiratory syncytial virus (RSV) (20%). The hemagglutinin-esterase-fusion (HEF) gene was sequenced in 37 specimens, and both C/Kanagawa and C/Sao Paulo lineages were detected in inpatients and outpatients. CONCLUSIONS: We found seasonal circulation of influenza C with year-to-year variability. Detection was most frequent among young children, but occurred in all ages. Some cases positive for influenza C, particularly those with co-morbid conditions, had severe disease, suggesting a need for further study of the role of influenza C virus in the pathogenesis of respiratory disease.
has issue date	2017-10-23(xsd:dateTime)
bibo:doi	10.1093/cid/cix931
bibo:pmid	29069373
has license	bronze-oa
sha1sum (hex)	826199b710b661d8c727eadc38f0b33fabcffe4b
schema:url	https://doi.org/10.1093/cid/cix931
resource representing a document's title	Detection of influenza C viruses among outpatients and patients hospitalized for severe acute respiratory infection, Minnesota, 2013–2016
has PubMed Central identifier	PMC5862734
has PubMed identifier	29069373
schema:publication	Clinical Infectious Diseases
resource representing a document's body	covid:826199b710b661d8c727eadc38f0b33fabcffe4b#body_text
is schema:about of	named entity 'SEVERE ACUTE RESPIRATORY INFECTION' named entity 'PATIENTS' named entity 'MINNESOTA' named entity 'CLINICAL' named entity 'OUTPATIENTS' named entity 'HOSPITALIZED' named entity 'INFECTIOUS DISEASES' named entity 'DETECTION' named entity 'INFLUENZA C VIRUSES' named entity 'Influenza' named entity 'Viruses' named entity 'Severe Acute Respiratory Infection' named entity 'Minnesota' named entity 'Influenza' named entity 'adenovirus' named entity 'influenza' named entity 'influenza' named entity 'sentinel surveillance' named entity 'influenza' named entity 'cough' named entity 'infection' named entity 'noninfectious' named entity 'Influenza' named entity 'follow-up' named entity 'comorbid condition' named entity 'neuraminidase' named entity 'ILI' named entity 'pathogen' named entity 'SARI' named entity 'CDC' named entity 'maintenance chemotherapy' named entity 'symptom' named entity 'neighbor-joining method' named entity 'asymptomatic' named entity 'pathogen' named entity 'older patients' named entity 'symptom' named entity 'pathogenicity' named entity 'influenza' named entity 'DNA Analyzer' named entity 'influenza' named entity 'respiratory illness' named entity 'influenza' named entity 'clinician' named entity 'antibodies' named entity 'influenza' named entity 'influenza' named entity 'RSV' named entity 'Minneapolis' named entity 'respiratory infections' named entity 'influenza C virus' named entity 'rRT-PCR' named entity 'underlying condition' named entity 'respiratory distress' named entity 'influenza' named entity 'influenza C virus' named entity 'residual volume' named entity 'influenza' named entity 'influenza' named entity 'protein' named entity 'sore throat' named entity 'comorbidities' named entity 'viral infection' named entity 'serological' named entity 'Phylogenetic analyses' named entity 'pathogen' named entity 'human influenza'

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