About: Novel smacoviruses identified in the faeces of two wild felids: North American bobcat and African lion

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About: Novel smacoviruses identified in the faeces of two wild felids: North American bobcat and African lion Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
title	Novel smacoviruses identified in the faeces of two wild felids: North American bobcat and African lion
Creator	Varsani, Arvind Kraberger, Simona Packer, Craig Fountain-Jones, Nicolas Riley, Seth Serieys, ·
source	Medline; PMC
abstract	Smacoviruses are small circular single-stranded DNA viruses that appear to be prevalent in faeces of a range of animals and have also been found in a few insect species. In this study, we report the first viral genomes from faeces of free-roaming wild felids on two continents. Two smacoviruses were recovered from the faeces of two North American bobcats (Lynx rufus), and one was recovered from an African lion (Panthera leo). All three genomes are genetically different, sharing 59-69% genome-wide sequence identity to other smacoviruses. These are the first full smacovirus genome sequences associated with a large top-end feline predator, and their presence in these samples suggests that feline faeces are a natural niche for the organisms that these viruses infect. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00705-019-04329-3) contains supplementary material, which is available to authorized users.
has issue date	2019-06-22(xsd:dateTime)
bibo:doi	10.1007/s00705-019-04329-3
bibo:pmid	31240485
has license	no-cc
sha1sum (hex)	a98278e14dd8ec57deb815bc5f5acb1bdd967f4f
schema:url	https://doi.org/10.1007/s00705-019-04329-3
resource representing a document's title	Novel smacoviruses identified in the faeces of two wild felids: North American bobcat and African lion
has PubMed Central identifier	PMC7086625
has PubMed identifier	31240485
schema:publication	Arch Virol
resource representing a document's body	covid:a98278e14dd8ec57deb815bc5f5acb1bdd967f4f#body_text
is schema:about of	named entity 'FAECES' named entity 'FELIDS' named entity 'NOVEL' named entity 'AFRICAN' named entity 'ASSOCIATED WITH' named entity 'GENOME' named entity 'LION' named entity 'DIFFERENT' named entity 'THESE' named entity 'FELINE' named entity 'OF FREE' named entity 'IDENTIFIED' named entity 'PRESENCE' named entity 'FOUND' named entity 'RECOVERED' named entity 'LARGE' named entity 'SEQUENCES' named entity 'INSECT' named entity 'INFECT' named entity 'NORTH AMERICAN' named entity 'AFRICAN' named entity 'SINGLE-STRANDED DNA' named entity 'LEO' named entity 'BOBCAT' named entity 'ANNOTATED' named entity 'WILD' named entity 'SAMPLES' named entity 'PREVALENT' named entity 'VIRUSES' named entity 'PREDATOR' named entity 'RANGE' named entity 'SEQUENCE IDENTITY' named entity 'CIRCULAR' named entity 'SPECIES' named entity 'ANIMALS' named entity 'LION' named entity 'NATURAL' named entity 'WILD' named entity 'VIRAL' named entity 'APPEAR' named entity 'END' named entity 'GENOMES' named entity 'SMALL' named entity 'SEQUENCE RECORD' named entity 'ORGANISMS' named entity 'HAVE' named entity 'CONTINENTS' named entity 'DNA VIRUSES' named entity 'SHARING' named entity 'REPORT' named entity 'NORTH AMERICAN' named entity 'FAECES' named entity 'THEIR' named entity 'STUDY' named entity 'FELIDS' named entity 'WIDE' named entity 'NICHE' named entity 'range' named entity 'study' named entity 'continents' named entity 'Lynx rufus' named entity 'single-stranded DNA viruses' named entity 'faeces' named entity 'genome-wide' named entity 'North American' named entity 'bobcat' named entity 'archaeon' named entity 'common ancestor' named entity 'open reading frames' named entity 'primers' named entity 'TTT' named entity 'intergenic regions' named entity 'felid' named entity 'sequenced' named entity 'amino acid sequences' named entity 'African lion'

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