About: Molecular characterization of a novel bovine group A rotavirus

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About: Molecular characterization of a novel bovine group A rotavirus Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
title	Molecular characterization of a novel bovine group A rotavirus
Creator	Fukai, Katsuhiko Inoue, Kyoichi Iwane, Kiyoko Koike, Shinpei Tajima, Kazuhiko Takahashi, Takashi
source	Elsevier; Medline; PMC
abstract	In this study, by partial sequence analysis of the genome segments encoding VP5* and VP7, we characterized a novel bovine group A rotavirus, namely, Tak2, that was detected from adult cattle diarrhea in Tochigi Prefecture, Japan. The nucleotide (nt) and deduced amino acid (aa) sequences of the genome segments encoding VP5* and half of the amino terminal portion of VP7 of Tak2 revealed a low identity with those of group A rotaviruses carrying previously published P and G type specificities (VP5: nt identity, 61.6%–67.6% and aa identity, 58.0%–71.4%; half of the amino terminal portion of VP7: nt identity, 57.8%–73.5% and aa identity, 61.2%–70.9%). Additionally, phylogenetic analysis of the nt sequences of the genome segments encoding VP5 and half of the amino terminal portion of VP7 revealed that Tak2 formed a branch separate from the established P and G types. These results suggested that Tak2 could possess novel P and G types yet not reported among group A rotaviruses.
has issue date	2007-07-20(xsd:dateTime)
bibo:doi	10.1016/j.vetmic.2007.02.010
bibo:pmid	17368763
has license	no-cc
sha1sum (hex)	dcedae63b355b29c032e8446ac1b6baa33081fbf
schema:url	https://doi.org/10.1016/j.vetmic.2007.02.010
resource representing a document's title	Molecular characterization of a novel bovine group A rotavirus
has PubMed Central identifier	PMC7127692
has PubMed identifier	17368763
schema:publication	Vet Microbiol
resource representing a document's body	covid:dcedae63b355b29c032e8446ac1b6baa33081fbf#body_text
is schema:about of	named entity 'cattle' named entity 'CHARACTERIZATION' named entity 'DETECTED' named entity 'GROUP A ROTAVIRUS' named entity 'SEQUENCE ANALYSIS' named entity 'GENOME' named entity 'BOVINE' named entity 'ADULT' named entity 'HALF' named entity 'TYPES' named entity 'TERMINAL PORTION' named entity 'SEQUENCES' named entity 'SPECIFICITIES' named entity 'THESE' named entity 'RESULTS' named entity 'PREVIOUSLY' named entity 'ENCODING' named entity 'AMINO TERMINAL' named entity 'NOVEL' named entity 'VP5' named entity 'FORMED' named entity 'NOT REPORTED' named entity 'GROUP A ROTAVIRUS' named entity 'JAPAN' named entity 'AMINO ACID' named entity 'MOLECULAR' named entity 'BOVINE' named entity '61.2' named entity 'PHYLOGENETIC ANALYSIS' named entity 'CHARACTERIZED' named entity 'IDENTITY' named entity 'BRANCH' named entity 'POSSESS' named entity 'ESTABLISHED' named entity 'CATTLE' named entity 'PUBLISHED' named entity 'TYPE' named entity 'NOVEL' named entity 'TOCHIGI PREFECTURE' named entity 'PARTIAL' named entity 'NUCLEOTIDE' named entity 'SEPARATE' named entity 'CARRYING' named entity 'VP7' named entity 'SEGMENTS' named entity 'LOW' named entity 'REVEALED' named entity 'STUDY' named entity 'DIARRHEA' covid:arg/dcedae63b355b29c032e8446ac1b6baa33081fbf named entity 'types' named entity 'identity' named entity 'diarrhea' named entity 'rotavirus' named entity 'VP7' named entity 'sequence analysis' named entity 'amino terminal' named entity 'rotavirus' named entity 'VP5' named entity 'nucleotide' named entity 'genome' named entity 'VP7' named entity 'rotavirus' named entity 'diarrhea' named entity 'genotype' named entity 'cattle' named entity 'animal origin' named entity 'genotype' named entity 'trypsin' named entity 'primers' named entity 'genome' named entity 'bovine coronavirus' named entity 'genome' named entity 'guinea pig' named entity 'VP7' named entity 'diarrhea'

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