About: Species C Rotaviruses in Children with Diarrhea in India, 2010–2013: A Potentially Neglected Cause of Acute Gastroenteritis

Facets (new session)
Description
Metadata
Settings
- owl:sameAs
- Inference Rule:

About: Species C Rotaviruses in Children with Diarrhea in India, 2010–2013: A Potentially Neglected Cause of Acute Gastroenteritis Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Species C Rotaviruses in Children with Diarrhea in India, 2010–2013: A Potentially Neglected Cause of Acute Gastroenteritis
Creator	Dhama, Kuldeep Bhat, Sudipta Deol, Pallavi Ghosh, Souvik Kobayashi, Nobumichi Nadia, Touil Rakholia, Ritu Rawat, Vinita Sircar, Shubhankar Vlasova, Anastasia Kattoor, Jobin Id, Yashpal Singh Malik,
Source	PMC
abstract	All over the world, children and adults are severely affected by acute gastroenteritis, caused by one of the emerging enteric pathogens, rotavirus C (RVC). At present, no extensive surveillance program is running for RVC in India, and its prevalence is largely unknown except cases of local outbreaks. Here, we intended to detect the presence of RVC in diarrheic children visiting or admitted to hospitals in Haldwani (state of Uttarakhand, India), a city located in the foothills of the Himalayas. During 2010–2013, we screened 119 samples for RVC by an RVC VP6 gene-specific RT-PCR. Of these, 38 (31.93%) were found positive, which is higher than the incidence rates reported so far from India. The phylogenetic analysis of the derived nucleotide sequences from one of the human RVC (HuRVC) isolates, designated as HuRVC/H28/2013/India, showed that the study isolate belongs to genotype I2, P2 and E2 for RVC structural genes 6 and 4 (VP6, and VP4) and non-structural gene 4 (NSP4), respectively. Furthermore, the VP6 gene of HuRVC/H28/2013/India shows the highest similarity to a recently-reported human-like porcine RVC (PoRVC/ASM140/2013/India, KT932963) from India suggesting zoonotic transmission. We also report a full-length NSP4 gene sequence of human RVC from India. Under the One-health platforms there is a need to launch combined human and animal RVC surveillance programs for a better understanding of the epidemiology of RVC infections and for implementing control strategies.
has issue date	2018-02-17(xsd:dateTime)
bibo:doi	10.3390/pathogens7010023
bibo:pmid	29462971
has license	cc-by
sha1sum (hex)	f7658f780f7b559a2ddb1649957efda8a94f534b
schema:url	https://doi.org/10.3390/pathogens7010023
resource representing a document's title	Species C Rotaviruses in Children with Diarrhea in India, 2010–2013: A Potentially Neglected Cause of Acute Gastroenteritis
has PubMed Central identifier	PMC5874749
has PubMed identifier	29462971
schema:publication	Pathogens
resource representing a document's body	covid:f7658f780f7b559a2ddb1649957efda8a94f534b#body_text
is schema:about of	named entity 'human' named entity 'control' named entity 'India' named entity 'prevalence' named entity 'located' named entity 'platforms' named entity 'Here' named entity '2013' named entity 'visiting' named entity 'epidemiology' named entity 'India' named entity 'Haldwani' named entity 'RVC' named entity 'India' named entity 'human' named entity 'zoonotic transmission' named entity 'Haldwani' named entity 'India' named entity 'rotavirus' named entity 'gene' named entity 'structural gene' named entity 'epidemiology' named entity 'porcine' named entity 'India' named entity 'India' named entity 'cases' named entity 'recombinant' named entity 'NSP4' named entity 'NSP4' named entity 'South Korea' named entity 'NSP4' named entity 'Eurofins' named entity 'India' named entity 'Japan' named entity 'NSP4' named entity 'VP6' named entity 'antigenicity' named entity 'amino acid' named entity 'amino acid sequences' named entity 'sequence identity' named entity 'infection' named entity 'gene sequences' named entity 'nucleotide' named entity 'India' named entity 'calicivirus' named entity 'NGS' named entity 'gene' named entity 'protein analysis' named entity 'gene' named entity 'VP6' named entity 'sequence distance' named entity 'recombinant' named entity 'Thermo Fisher' named entity 'nucleotide' named entity 'viruses' named entity 'capsid protein' named entity 'Sanger sequencing' named entity 'gene' named entity 'protein' named entity 'primers' named entity 'calicivirus' named entity 'maximum likelihood' named entity 'gene' named entity 'point mutations' named entity 'genome sequence' named entity 'gene' named entity 'amino acids' named entity 'virus' named entity 'NSP4'

Faceted Search & Find service v1.13.91 as of Mar 24 2020

Alternative Linked Data Documents: Sponger | ODE Content Formats:

RDF

ODATA

Microdata

About

OpenLink Virtuoso version 07.20.3229 as of Jul 10 2020, on Linux (x86_64-pc-linux-gnu), Single-Server Edition (94 GB total memory)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2024 OpenLink Software