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About:
Hypergraph Learning for Identification of COVID-19 with CT Imaging
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Academic Article
research paper
schema:ScholarlyArticle
isDefinedBy
Covid-on-the-Web dataset
has title
Hypergraph Learning for Identification of COVID-19 with CT Imaging
Creator
Xia, Liming
Yan, Fuhua
Shi, Feng
Wei, Ying
Shao, Ying
Shan, Fei
Gao, Yue
Di, Donglin
Ding, Zhongxiang
Gao, Yaozong
Han, Miaofei
Li, Shengrui
Mo, Zhanhao
Shen, Dinggang
Sui, He
Source
ArXiv
abstract
The coronavirus disease, named COVID-19, has become the largest global public health crisis since it started in early 2020. CT imaging has been used as a complementary tool to assist early screening, especially for the rapid identification of COVID-19 cases from community acquired pneumonia (CAP) cases. The main challenge in early screening is how to model the confusing cases in the COVID-19 and CAP groups, with very similar clinical manifestations and imaging features. To tackle this challenge, we propose an Uncertainty Vertex-weighted Hypergraph Learning (UVHL) method to identify COVID-19 from CAP using CT images. In particular, multiple types of features (including regional features and radiomics features) are first extracted from CT image for each case. Then, the relationship among different cases is formulated by a hypergraph structure, with each case represented as a vertex in the hypergraph. The uncertainty of each vertex is further computed with an uncertainty score measurement and used as a weight in the hypergraph. Finally, a learning process of the vertex-weighted hypergraph is used to predict whether a new testing case belongs to COVID-19 or not. Experiments on a large multi-center pneumonia dataset, consisting of 2,148 COVID-19 cases and 1,182 CAP cases from five hospitals, are conducted to evaluate the performance of the proposed method. Results demonstrate the effectiveness and robustness of our proposed method on the identification of COVID-19 in comparison to state-of-the-art methods.
has issue date
2020-05-07
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arxiv
sha1sum (hex)
0401ddd31ae599dfa12a41d7de6b2cf626065157
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Hypergraph Learning for Identification of COVID-19 with CT Imaging
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covid:0401ddd31ae599dfa12a41d7de6b2cf626065157#body_text
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named entity 'Then'
named entity 'computed'
named entity 'large'
named entity 'confusing'
named entity 'Uncertainty'
named entity 'features'
named entity 'HYPERGRAPH'
named entity 'IMAGING'
named entity 'extracted'
named entity 'tool'
named entity 'COVID-19'
named entity 'tackle'
named entity 'images'
named entity 'Experiments'
named entity 'groups'
named entity 'early'
named entity 'represented'
named entity 'learning'
named entity 'cases'
named entity 'COVID-19'
named entity 'imaging'
named entity 'features'
named entity 'COVID-19'
named entity 'COVID-19'
named entity 'hypergraph'
named entity 'radiomics'
named entity 'global public health'
named entity 'COVID-19'
named entity 'CT imaging'
named entity 'COVID-19'
named entity 'started'
named entity 'low-quality data'
named entity 'Cross-Entropy'
named entity 'spectral clustering'
named entity 'iHL'
named entity 'data quality'
named entity 'Toshiba'
named entity 'approximate inference'
named entity 'COVID-19'
named entity 'Japan'
named entity 'Support Vector Machine'
named entity 'Hypergraph'
named entity 'learning process'
named entity 'pneumonia'
named entity 'hypergraph'
named entity 'hyperedge'
named entity 'true distribution'
named entity 'hypergraph'
named entity 'Neural Network'
named entity 'hyperedge'
named entity 'radiomics'
named entity 'cross-entropy'
named entity 'COVID-19'
named entity 'COVID-19'
named entity 'vertex weights'
named entity 'relative gains'
named entity 'gene sequencing'
named entity 'Gaussian distribution'
named entity 'COVID-19'
named entity 'RT-PCR'
named entity 't-test'
named entity 'accurate and precise'
named entity 'loss function'
named entity 'COVID-19'
named entity 'radiomics'
named entity 'Siemens'
named entity 'COVID-19'
named entity 'COVID-19'
named entity 'confusion matrix'
named entity 'Vapnik'
named entity 'vectors'
named entity 'hypergraph'
named entity 'COVID-19'
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