About: Emergence of a genotype I variant of avian infectious bronchitis virus from Northern part of India

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About: Emergence of a genotype I variant of avian infectious bronchitis virus from Northern part of India Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Emergence of a genotype I variant of avian infectious bronchitis virus from Northern part of India
Creator	Kumar, Sachin Jakhesara, Subhash Joshi, Chaitanya Nath, Barnali Pal, J
Source	Elsevier; Medline; PMC
abstract	Abstract Infectious bronchitis virus (IBV) is one of the foremost causes of a persistent economic burden to poultry industries worldwide. IBV belongs to the genus Gammacoronavirus within the family Coronaviridae. The IBV infection leads to respiratory and nephrogenic symptoms in broiler chickens. In addition, its infection leads to reduced fertility and hatchability in layer birds. We determined the first complete genome sequence of a variant IBV from an outbreak in Haryana state of the Northern part of India using next generation sequencing. On phylogenetic analysis of the IBV isolate, it clustered with genotype I lineage 1 (GI-1). The deduced amino acid sequence of S gene of IBV isolates showed a high level of identity with strains isolated from Tamil Nadu and the reference vaccine strains. Our result suggests that the IBV virus isolated from unvaccinated chicken flocks in North India might be a revertant strain originally evolved from the live attenuated vaccine strains used in the region. Determination of the complete genome sequence of additional IBV isolates from India is necessary to understand the epidemiology of IBV in India.
has issue date	2018-07-31(xsd:dateTime)
bibo:doi	10.1016/j.actatropica.2018.04.004
bibo:pmid	29621536
has license	els-covid
sha1sum (hex)	1097235db7dcb3dd072aaadb213051cfb0e6f6d2
schema:url	https://doi.org/10.1016/j.actatropica.2018.04.004
resource representing a document's title	Emergence of a genotype I variant of avian infectious bronchitis virus from Northern part of India
has PubMed Central identifier	PMC7172955
has PubMed identifier	29621536
schema:publication	Acta Tropica
resource representing a document's body	covid:1097235db7dcb3dd072aaadb213051cfb0e6f6d2#body_text
is schema:about of	named entity 'IBV' named entity 'genus' named entity 'belongs' named entity 'Our' named entity 'isolates' named entity 'evolved' named entity 'originally' named entity 'IBV' named entity 'infectious bronchitis' named entity 'MIGHT BE' named entity 'NORTHERN' named entity 'HARYANA STATE' named entity 'LAYER' named entity 'INDIA' named entity 'INFECTIOUS BRONCHITIS VIRUS' named entity 'CHICKENS' named entity 'USING' named entity 'IBV' named entity 'IBV' named entity 'infection' named entity 'isolates' named entity 'Haryana' named entity 'genome' named entity 'Gammacoronavirus' named entity 'additional' named entity 'complete' named entity 'reduced' named entity 'attenuated vaccine' named entity 'infection' named entity 'genome sequence' named entity 'India' named entity 'IBV' named entity 'IBV' named entity 'reduced fertility' named entity 'Coronaviridae' named entity 'genus' named entity 'vaccine' named entity 'glycoprotein' named entity 'Andhra Pradesh' named entity 'bursa of Fabricius' named entity 'Gamma distribution' named entity 'viral membrane' named entity 'IBV' named entity 'Molecular Phylogenetic' named entity 'Codon' named entity 'broiler chickens' named entity 'protein' named entity 'Life Technologies' named entity 'India' named entity 'Serine' named entity 'phylogenetic analysis' named entity 'inoculation' named entity 'IBV' named entity 'amino-terminal' named entity 'genotype' named entity 'Haryana' named entity 'virus' named entity 'IBV' named entity 'natural host' named entity 'Orissa' named entity 'genotypes' named entity 'Andhra Pradesh' named entity 'genome sequence' named entity 'infection' named entity 'vaccine' named entity 'gene' named entity 'ion torrent' named entity 'IBV' named entity 'IBV' named entity 'IBV' named entity 'TRIZOL' named entity 'Roche Diagnostics' named entity 'RNA' named entity '5′UTR' named entity 'cell membrane' named entity 'Andhra Pradesh' named entity 'vaccines'

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