About: Molecular cloning and sequence comparison of the S1 glycoprotein of the Gray and JMK strains of avian infectious bronchitis virus

Facets (new session)
Description
Metadata
Settings
- owl:sameAs
- Inference Rule:

About: Molecular cloning and sequence comparison of the S1 glycoprotein of the Gray and JMK strains of avian infectious bronchitis virus Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Molecular cloning and sequence comparison of the S1 glycoprotein of the Gray and JMK strains of avian infectious bronchitis virus
Creator	Jackwood, Mark Moo Kwon, Hyuk
Source	PMC
abstract	The nucleotide sequences of S1 glycoprotein genes of the Gray and JMK strains of avian infectious bronchitis virus (IBV) were determined and compared with published sequences for IBV. The IBV Gray and JMK strains had 99% nucleotide sequence similarity. The overall nucleotide sequence similarity of the Gray and JMK strains compared with other IBV strains was between 82.0% and 87.4%. The similarity of the predicted amino acid sequence for the S1 glycoproteins of the Gray and JMK strains was 98.8%. Six of the 10 differences in the amino acid sequence were found between residues 99 and 127, suggesting a possible role for that region in the tissue trophisms of the viruses. The S1 glycoprotein of the Gray and JMK strains had 79.5%–84.6% amino acid similarity with the published sequence of other IBV strains. Serine instead of phenylalanine was observed in the protease cleavage site between the S1 and S2 glycoprotein subunits for the Gray and JMK strains, which was similar to the published sequence for the Ark99 and SE17 strains. The significance of that amino acid change is not known. Based on the nucleotide sequence of the Gray and JMK strains, theBsmAI restriction enzyme was selected by computer analysis and was used in restriction fragment length polymorphism analysis to differentiate the two strains.
has issue date	1995-01-01(xsd:dateTime)
bibo:doi	10.1007/bf01702878
bibo:pmid	7597801
has license	no-cc
sha1sum (hex)	15cdd3db4af7c018bf6ace38503f83c94a7e4748
schema:url	https://doi.org/10.1007/bf01702878
resource representing a document's title	Molecular cloning and sequence comparison of the S1 glycoprotein of the Gray and JMK strains of avian infectious bronchitis virus
has PubMed Central identifier	PMC7089256
has PubMed identifier	7597801
schema:publication	Virus Genes
resource representing a document's body	covid:15cdd3db4af7c018bf6ace38503f83c94a7e4748#body_text
is schema:about of	named entity 'GRAY' named entity 'SIGNIFICANCE' named entity 'SERINE' named entity 'BASED' named entity 'SELECTED' named entity 'GLYCOPROTEIN' named entity 'SEQUENCE SIMILARITY' named entity 'POSSIBLE' named entity 'GRAY' named entity 'OVERALL' named entity 'AVIAN INFECTIOUS BRONCHITIS VIRUS' named entity 'DETERMINED' named entity 'SIMILARITY' named entity 'Serine' named entity 'strains' named entity 'Six' named entity 'Sequence' named entity 'PROTEASE CLEAVAGE' named entity 'AMINO ACID CHANGE' named entity 'COMPUTER ANALYSIS' named entity 'DIFFERENTIATE' named entity 'AVIAN INFECTIOUS BRONCHITIS VIRUS' named entity 'SITE' named entity 'RESTRICTION ENZYME' named entity 'TISSUE' named entity 'PHENYLALANINE' named entity 'GLYCOPROTEIN' named entity 'MOLECULAR CLONING' named entity 'OBSERVED' named entity '242' named entity 'GLYCOPROTEINS' named entity 'SEQUENCE' named entity 'NOT KNOWN' named entity 'ROLE' named entity 'RESTRICTION FRAGMENT LENGTH POLYMORPHISM ANALYSIS' named entity 'PREDICTED' named entity 'NUCLEOTIDE SEQUENCES' named entity 'REGION' named entity 'SEQUENCE COMPARISON' named entity 'STRAINS' named entity 'PUBLISHED' named entity 'AMINO ACID' named entity 'SEQUENCES' named entity 'USED' named entity 'VIRUSES' named entity 'NUCLEOTIDE SEQUENCE' named entity 'STRAINS' named entity 'GENES' named entity 'AMINO ACID SEQUENCE' named entity 'COMPARED' named entity 'FOUND' covid:arg/15cdd3db4af7c018bf6ace38503f83c94a7e4748 named entity 'Gray' named entity 'amino acid' named entity 'glycoprotein' named entity 'strains' named entity 'length' named entity 'nucleotide sequence' named entity 'strains' named entity 'Avian' named entity 'IBV' named entity 'protease' named entity 'Serine' named entity 'avian infectious bronchitis virus' named entity 'nucleotide sequence' named entity 'restriction enzyme' named entity 'Molecular Cloning' named entity 'Avian infectious bronchitis virus' named entity 'Massachusetts' named entity 'laboratory strain' named entity 'serogroup' named entity 'serotype' named entity 'Perkin-Elmer' named entity 'chicken' named entity 'aliphatic' named entity 'serotypes' named entity 'restriction sites' named entity 'clone' named entity 'Escherichia coli' named entity 'Antigenic'

Faceted Search & Find service v1.13.91 as of Mar 24 2020

Alternative Linked Data Documents: Sponger | ODE Content Formats:

RDF

ODATA

Microdata

About

OpenLink Virtuoso version 07.20.3229 as of Jul 10 2020, on Linux (x86_64-pc-linux-gnu), Single-Server Edition (94 GB total memory)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2024 OpenLink Software