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About:
On the sensitivity of non-pharmaceutical intervention models for SARS-CoV-2 spread estimation
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schema:ScholarlyArticle
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wasabi.inria.fr
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Type:
Academic Article
research paper
schema:ScholarlyArticle
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type
Academic Article
research paper
schema:ScholarlyArticle
isDefinedBy
Covid-on-the-Web dataset
has title
On the sensitivity of non-pharmaceutical intervention models for SARS-CoV-2 spread estimation
Creator
Dahlström, Örjan
Ekberg, Joakim
Spreco, Armin
Timpka, Toomas
Affiliations,
Bernhardsson, Bo
Carlson, Bagge
Carlson, Fredrik
Gustafsson, Fredrik
Heimerson, Albin
Jaldén, Joakim
Jidling, Carl
Jöud, Anna
Schön, Thomas
Soltesz, Kristian
Source
MedRxiv
abstract
Introduction: A series of modelling reports that quantify the effect of non pharmaceutical interventions (NPIs) on the spread of the SARS-CoV-2 virus have been made available prior to external scientific peer-review. The aim of this study was to investigate the method used by the Imperial College COVID-19 Research Team (ICCRT) for estimation of NPI effects from the system theoretical viewpoint of model identifiability. Methods: An input-sensitivity analysis was performed by running the original software code of the systems model that was devised to estimate the impact of NPIs on the reproduction number of the SARS-CoV-2 infection and presented online by ICCRT in Report 13 on March 30 2020. An empirical investigation was complemented by an analysis of practical parameter identifiability, using an estimation theoretical framework. Results: Despite being simplistic with few free parameters, the system model was found to suffer from severe input sensitivities. Our analysis indicated that the model lacks practical parameter identifiability from data. The analysis also showed that this limitation is fundamental, and not something readily resolved should the model be driven with data of higher reliability. Discussion: Reports based on system models have been instrumental to policymaking during the SARS-CoV-2 pandemic. With much at stake during all phases of a pandemic, we conclude that it is crucial to thoroughly scrutinise any SARS-CoV-2 effect analysis or prediction model prior to considering its use as decision support in policymaking. The enclosed example illustrates what such a review might reveal.
has issue date
2020-06-12
(
xsd:dateTime
)
bibo:doi
10.1101/2020.06.10.20127324
has license
medrxiv
sha1sum (hex)
182ab0821cd443ff288139140cbbc0582113581e
schema:url
https://doi.org/10.1101/2020.06.10.20127324
resource representing a document's title
On the sensitivity of non-pharmaceutical intervention models for SARS-CoV-2 spread estimation
resource representing a document's body
covid:182ab0821cd443ff288139140cbbc0582113581e#body_text
is
schema:about
of
named entity 'external'
named entity 'METHOD'
named entity 'Research'
named entity 'The'
named entity 'viewpoint'
named entity 'SARS-CoV-2'
named entity 'identifiability'
named entity 'medRxiv'
named entity 'what-if'
named entity 'April 29'
named entity 'Sweden'
named entity 'April 24'
named entity 'preprint'
named entity 'medRxiv'
named entity 'correlation'
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named entity 'preprint'
named entity 'peer review'
named entity 'lockdown'
named entity 'April 29'
named entity 'evolution'
named entity 'Github'
named entity 'infection'
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named entity 'SARS-CoV-2'
named entity 'source code'
named entity 'CC-BY-NC-ND 4.0'
named entity 'linear regression'
named entity 'April 6'
named entity 'quarantine'
named entity 'preprint'
named entity 'exit strategies'
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named entity 'March 18'
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named entity 'closure of schools'
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named entity 'policy decisions'
named entity 'Imperial College'
named entity 'reproduction number'
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named entity 'Sweden'
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