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About:
RNA Sequencing of H3N2 Influenza Virus-Infected Human Nasal Epithelial Cells from Multiple Subjects Reveals Molecular Pathways Associated with Tissue Injury and Complications
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wasabi.inria.fr
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Type:
Academic Article
research paper
schema:ScholarlyArticle
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type
Academic Article
research paper
schema:ScholarlyArticle
isDefinedBy
Covid-on-the-Web dataset
has title
RNA Sequencing of H3N2 Influenza Virus-Infected Human Nasal Epithelial Cells from Multiple Subjects Reveals Molecular Pathways Associated with Tissue Injury and Complications
Creator
Liu, Jing
Yan, Yan
Lee, Bernett
Lum, Josephine
Rotzschke, Olaf
Thong, Mark
Choi, Hyung
Chow, Vincent
Tan, Kai
Lim, Hui
Wang, De
Kumar Andiappan, Anand
Ong, Yew
Tang, See
Ting He, Ting
Source
PMC
abstract
The human nasal epithelium is the primary site of exposure to influenza virus, the initiator of host responses to influenza and the resultant pathologies. Influenza virus may cause serious respiratory infection resulting in major complications, as well as severe impairment of the airways. Here, we elucidated the global transcriptomic changes during H3N2 infection of human nasal epithelial cells from multiple individuals. Using RNA sequencing, we characterized the differentially-expressed genes and pathways associated with changes occurring at the nasal epithelium following infection. We used in vitro differentiated human nasal epithelial cell culture model derived from seven different donors who had no concurrent history of viral infections. Statistical analysis highlighted strong transcriptomic signatures significantly associated with 24 and 48 h after infection, but not at the earlier 8-h time point. In particular, we found that the influenza infection induced in the nasal epithelium early and altered responses in interferon gamma signaling, B-cell signaling, apoptosis, necrosis, smooth muscle proliferation, and metabolic alterations. These molecular events initiated at the infected nasal epithelium may potentially adversely impact the airway, and thus the genes we identified could serve as potential diagnostic biomarkers or therapeutic targets for influenza infection and associated disease management.
has issue date
2019-08-27
(
xsd:dateTime
)
bibo:doi
10.3390/cells8090986
bibo:pmid
31461941
has license
cc-by
sha1sum (hex)
1e981bc1ac8d6a8ea0f8e21991e3f525ae0a16a4
schema:url
https://doi.org/10.3390/cells8090986
resource representing a document's title
RNA Sequencing of H3N2 Influenza Virus-Infected Human Nasal Epithelial Cells from Multiple Subjects Reveals Molecular Pathways Associated with Tissue Injury and Complications
has PubMed Central identifier
PMC6770044
has PubMed identifier
31461941
schema:publication
Cells
resource representing a document's body
covid:1e981bc1ac8d6a8ea0f8e21991e3f525ae0a16a4#body_text
is
schema:about
of
named entity 'responses'
named entity 'concurrent'
named entity 'time point'
named entity 'derived'
named entity 'Multiple'
named entity 'RNA'
covid:arg/1e981bc1ac8d6a8ea0f8e21991e3f525ae0a16a4
named entity 'induced'
named entity 'primary'
named entity 'respiratory infection'
named entity 'pathologies'
named entity 'individuals'
named entity 'multiple'
named entity 'culture'
named entity 'epithelial cells'
named entity 'infection'
named entity 'genes'
named entity 'targets'
named entity 'apoptosis'
named entity 'viral infections'
named entity 'transcriptomic'
named entity 'epithelium'
named entity 'transcriptomic'
named entity 'infection'
named entity 'epithelium'
named entity 'therapeutic targets'
named entity 'epithelium'
named entity 'Tissue Injury'
named entity 'RNA'
named entity 'CYP26A1'
named entity 'controlled condition'
named entity 'CCL11'
named entity 'PSMA6'
named entity 'innate immune responses'
named entity 'IL-8'
named entity 'Gene Ontology'
named entity 'influenza'
named entity 'apoptosis'
named entity 'Wilcoxon signed-rank test'
named entity 'upper airway'
named entity 'nasal mucosa'
named entity 'gene'
named entity 'Gene Ontology'
named entity 'IFNγ'
named entity 'inoculum'
named entity 'p-value'
named entity 'gene'
named entity 'severe infections'
named entity 'negative regulator'
named entity 'RIG-I'
named entity 'epithelium'
named entity 'hpi'
named entity 'Gene Ontology'
named entity 'DNA repair'
named entity 'influenza infection'
named entity 'B-cell receptor'
named entity 'TNFSF10'
named entity 'Gene Ontology'
named entity 'infection'
named entity 'influenza'
named entity 'immune responses'
named entity 'epithelial'
named entity 'chemokines'
named entity 'antigen processing'
named entity 'p-values'
named entity 'immune functions'
named entity 'hpi'
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