About: Endangered wild salmon infected by newly discovered viruses

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An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Endangered wild salmon infected by newly discovered viruses
Creator	Li, Shaorong Tabata, Amy Teffer, Amy Patterson, David Cicco, Emiliano Ferguson, Hugh Kaukinen, Karia Miller, Kristina Ming, Tobi Mordecai, Gideon Schulze, Angela Suttle, Curtis
Source	Medline; PMC
abstract	The collapse of iconic, keystone populations of sockeye (Oncorhynchus nerka) and Chinook (Oncorhynchus tshawytscha) salmon in the Northeast Pacific is of great concern. It is thought that infectious disease may contribute to declines, but little is known about viruses endemic to Pacific salmon. Metatranscriptomic sequencing and surveillance of dead and moribund cultured Chinook salmon revealed a novel arenavirus, reovirus and nidovirus. Sequencing revealed two different arenavirus variants which each infect wild Chinook and sockeye salmon. In situ hybridisation localised arenavirus mostly to blood cells. Population surveys of >6000 wild juvenile Chinook and sockeye salmon showed divergent distributions of viruses, implying different epidemiological processes. The discovery in dead and dying farmed salmon of previously unrecognised viruses that are also widely distributed in wild salmon, emphasizes the potential role that viral disease may play in the population dynamics of wild fish stocks, and the threat that these viruses may pose to aquaculture.
has issue date	2019-09-03(xsd:dateTime)
bibo:doi	10.7554/elife.47615
bibo:pmid	31478480
has license	cc-by
sha1sum (hex)	1eb822e2417937f3273c3423e25cd1344ba9a1e7
schema:url	https://doi.org/10.7554/elife.47615
resource representing a document's title	Endangered wild salmon infected by newly discovered viruses
has PubMed Central identifier	PMC6721791
has PubMed identifier	31478480
schema:publication	eLife
resource representing a document's body	covid:1eb822e2417937f3273c3423e25cd1344ba9a1e7#body_text
is schema:about of	named entity 'viruses' named entity 'great' named entity 'processes' named entity 'dying' named entity 'distributed' named entity 'populations' named entity 'discovered' named entity 'INFECTED' named entity 'VIRUSES' named entity 'CHINOOK SALMON' named entity 'BUT' named entity 'INFECTIOUS DISEASE' named entity 'SALMON' named entity 'VIRUSES' named entity 'ROLE' named entity 'LOCALISED' named entity 'PACIFIC SALMON' named entity 'ENDEMIC' named entity 'DISTRIBUTIONS' named entity 'INFECT' named entity 'DEAD' named entity 'DIFFERENT' named entity 'THOUGHT' named entity 'LITTLE' named entity 'EPIDEMIOLOGICAL' named entity 'THESE' named entity 'POTENTIAL' named entity 'SURVEILLANCE' named entity 'ABOUT' named entity 'CONTRIBUTE ' named entity 'DISCOVERY' named entity 'KNOWN' named entity 'POPULATION DYNAMICS' named entity 'JUVENILE' named entity 'AQUACULTURE' named entity 'PLAY' named entity 'PROCESSES' named entity 'ARENAVIRUS' named entity 'DISTRIBUTED' named entity 'POSE' named entity 'POPULATION' named entity 'MORIBUND' named entity 'WILD' named entity 'SURVEYS' named entity 'ENDANGERED' named entity 'NEWLY DISCOVERED' named entity 'SALMON' named entity 'CONCERN' named entity 'VIRAL DISEASE' named entity 'REVEALED' named entity 'DYING' named entity 'SEQUENCING' named entity 'WILD FISH' named entity 'CULTURED' named entity 'KEYSTONE' named entity 'PREVIOUSLY' named entity 'NOVEL' named entity 'THREAT' named entity 'NORTHEAST' named entity 'REOVIRUS' named entity 'COLLAPSE' named entity 'WILD' named entity 'BLOOD CELLS' named entity 'CHINOOK' named entity 'GREAT' named entity 'IN SITU HYBRIDISATION' named entity 'VARIANTS' named entity 'SOCKEYE SALMON' named entity 'POPULATIONS' named entity 'arenavirus'

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