About: Molecular epidemiology of bovine toroviruses circulating in South Korea

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About: Molecular epidemiology of bovine toroviruses circulating in South Korea Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Molecular epidemiology of bovine toroviruses circulating in South Korea
Creator	Cho, Kyoung-Oh Hyun, Bang-Hun Kim, Ha-Hyun Park, Sang-Ik Park, Su-Jin Jeong, Young-Ju Lim, Guem-Ki Oh, Eun-Hee
Source	Elsevier; Medline; PMC
abstract	The prevalence of the bovine torovirus (BToV) and its genetic characterization have been reported in North America, Europe and Japan. Therefore, this study examined the prevalence and genetic diversity of the BToV in a total of 645 diarrheic fecal samples from 629 Korean native beef calf herds using RT-PCR and nested PCR with the primer pairs specific to a part of the BToV membrane (M) gene. Overall, 19 (2.9%) out of 645 diarrheic samples from 19 herds (6.9%) tested positive for BToVs by either RT-PCR or nested PCR. A comparison of the nucleotide (nt) and amino acid (aa) sequences of a part of the BToV M gene (409 bp) among the BToVs showed the Korean BToVs to have comparatively higher sequence homology to the Japanese and Dutch BToVs than to the American and Italian BToVs. Generally, the Korean BToV strains clustered with the Japanese and Dutch BToV strains. However, the American and Italian BToV strains clustered on a separate major branch, suggesting that these are more distantly related to other known BToV strains. These results suggest that the BToV infections are sporadic in diarrheic calves in South Korea, and the Korean BToV strains are more closely related to the Japanese and Dutch BToVs than to the American and Italian BToVs.
has issue date	2008-01-25(xsd:dateTime)
bibo:doi	10.1016/j.vetmic.2007.07.012
bibo:pmid	17719729
has license	no-cc
sha1sum (hex)	2d3b6840c1dcd17a5d76835c28a9298416accffe
schema:url	https://doi.org/10.1016/j.vetmic.2007.07.012
resource representing a document's title	Molecular epidemiology of bovine toroviruses circulating in South Korea
has PubMed Central identifier	PMC7117412
has PubMed identifier	17719729
schema:publication	Vet Microbiol
resource representing a document's body	covid:2d3b6840c1dcd17a5d76835c28a9298416accffe#body_text
is schema:about of	named entity 'MOLECULAR EPIDEMIOLOGY' named entity 'However' named entity 'Italian' named entity 'Korean' named entity 'clustered' named entity 'total' named entity 'fecal' named entity 'bovine' named entity 'BOVINE' named entity 'HIGHER' named entity 'COMPARISON' named entity 'ITALIAN' named entity 'STUDY' named entity 'POSITIVE FOR' named entity 'SOUTH KOREA' named entity 'PRIMER' named entity 'EXAMINED' named entity 'STRAINS' named entity 'PUBLISHED' named entity 'CALF' named entity 'MEMBRANE' named entity 'GENERALLY' named entity 'SEQUENCE HOMOLOGY' named entity 'TOTAL' named entity '282' named entity 'EITHER' named entity 'TOROVIRUSES' named entity 'HAVE' named entity 'PREVALENCE' named entity 'DISTANTLY' named entity 'SPORADIC' named entity 'GENE' named entity 'PAIRS' named entity 'GENETIC DIVERSITY' named entity 'THESE' named entity 'SOUTH KOREA' named entity 'CIRCULATING' named entity 'EUROPE' named entity 'GENETIC CHARACTERIZATION' named entity 'SEQUENCES' named entity 'BOVINE TOROVIRUS' named entity 'NATIVE' named entity 'RT-PCR' named entity 'CALVES' named entity 'FECAL' named entity 'NESTED PCR ' named entity 'OVERALL' named entity 'NESTED PCR' named entity 'MAJOR' named entity 'ITS' named entity 'KNOWN' named entity 'NORTH AMERICA' named entity 'REPORTED' named entity 'INFECTIONS' named entity 'CLUSTERED' named entity 'PART OF' named entity 'SPECIFIC' named entity 'JAPANESE' named entity 'SAMPLES' named entity 'KOREAN' named entity 'AMINO ACID' named entity 'M GENE' named entity '645' named entity 'USING' named entity 'BRANCH' named entity 'RELATED' named entity 'TESTED' named entity 'RESULTS' named entity 'NUCLEOTIDE' named entity 'SUGGEST' named entity 'DUTCH' named entity 'BEEF' named entity 'AMERICAN' named entity 'JAPAN'

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