About: Identification of a novel canine norovirus

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About: Identification of a novel canine norovirus Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Identification of a novel canine norovirus
Creator	Buonavoglia, Canio Elia, Gabriella Martella, Vito Lorusso, Eleonora Bányai, Krisztián Bodnar, Livia Catella, Cristiana Lanave, Gianvito Martino, Barbara
Source	Elsevier; Medline; PMC
abstract	By screening a collection of fecal samples from young dogs from different European countries, noroviruses (NoVs) were found in 13/294 (4.4%) animals with signs of enteritis whilst they were not detected in healthy dogs (0/42). An informative portion of the genome (3.4 kb at the 3′ end) was generated for four NoV strains. In the capsid protein VP1 region, strains 63.15/2015/ITA and FD53/2007/ITA were genetically related to the canine GVI.2 strain C33/Viseu/2007/PRT (97.4–98.6% nt and 90.3–98.6% aa). Strain FD210/2007/ITA displayed the highest identity to the GVI.1 canine strain Bari/91/2007/ITA (88.0% nt and 95.0% aa). Strain 5010/2009/ITA displayed only 66.6–67.6% nt and 75.5–81.6% aa identities to the GVI.1 canine strains FD210/2007/ITA and Bari/91/2007/ITA and the GVI feline strain M49-1/2012/JPN. Identity to the other canine/feline NoVs strains in the VP1 was lower than 67.6% nt and 62.7% aa. Based on the full-length VP1 amino acid sequence and the criteria proposed for distinction of NoV genotypes, the canine NoV 5010/2009/ITA could represent the prototype of a third GVI genotype, thus providing further evidence for the genetic heterogeneity of NoVs in carnivores.
has issue date	2017-04-24(xsd:dateTime)
bibo:doi	10.1016/j.meegid.2017.04.020
bibo:pmid	28450084
has license	no-cc
sha1sum (hex)	2e0eef7888633184f85b8afd59c032c90c7892d8
schema:url	https://doi.org/10.1016/j.meegid.2017.04.020
resource representing a document's title	Identification of a novel canine norovirus
has PubMed Central identifier	PMC7185614
has PubMed identifier	28450084
schema:publication	Infect Genet Evol
resource representing a document's body	covid:2e0eef7888633184f85b8afd59c032c90c7892d8#body_text
is schema:about of	named entity 'JPN' named entity 'Strain' named entity 'strain' named entity 'feline' named entity 'HEALTHY' named entity 'DISPLAYED' named entity 'IDENTITY' named entity 'YOUNG' named entity 'PROTOTYPE' named entity 'GVI' named entity 'GENETIC HETEROGENEITY' named entity 'GENERATED' named entity 'ENTERITIS' named entity 'C33' named entity 'CRITERIA' named entity 'DIFFERENT' named entity 'AMINO ACID SEQUENCE' named entity 'FELINE' named entity 'RELATED' named entity 'PROTEIN ' named entity 'END' named entity 'CANINE' named entity 'BARI' named entity 'SCREENING' named entity '80%' named entity 'NOT DETECTED' named entity 'PROPOSED' named entity 'VP1' named entity 'NOROVIRUS' named entity 'CANINE' named entity 'IDENTIFICATION' named entity 'LENGTH' named entity 'PROVIDING' named entity 'REGION' named entity 'EVIDENCE FOR' named entity 'NOVEL' named entity 'SIGNS' named entity 'COUNTRIES' named entity 'SAMPLES' named entity 'CARNIVORES' named entity 'CAPSID PROTEIN' named entity 'FECAL' named entity 'GENOTYPES' named entity 'GENOME' named entity 'FOUND' named entity 'NOROVIRUSES' named entity 'LOWER' named entity 'STRAINS' named entity 'NOV' named entity 'BASED' named entity 'INFORMATIVE' named entity 'COULD REPRESENT' named entity 'HIGHEST' named entity 'GENOTYPE' named entity 'COLLECTION' named entity 'PORTION' named entity 'DOGS' named entity 'EUROPEAN' named entity 'M49' named entity 'STRAIN' named entity '283' named entity 'ANIMALS' covid:arg/2e0eef7888633184f85b8afd59c032c90c7892d8 named entity 'GVI' named entity 'sequence' named entity 'strain' named entity 'genotypes' named entity 'strains' named entity 'dogs' named entity 'PRT' named entity 'screening' named entity 'Identification' named entity 'VP1'

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