About: Viral metagenomic analysis of feces of wild small carnivores

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An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
title	Viral metagenomic analysis of feces of wild small carnivores
Creator	Bodewes, Rogier Ruiz-Gonzalez, Aritz Dme Osterhaus, Albert Schapendonk, Claudia Smits, Saskia Van Den Brand, Judith
topic	covid:36def2d37441d9ab0833ba1a1a48c68184bae246#this
source	Medline; PMC
abstract	BACKGROUND: Recent studies have clearly demonstrated the enormous virus diversity that exists among wild animals. This exemplifies the required expansion of our knowledge of the virus diversity present in wildlife, as well as the potential transmission of these viruses to domestic animals or humans. METHODS: In the present study we evaluated the viral diversity of fecal samples (n = 42) collected from 10 different species of wild small carnivores inhabiting the northern part of Spain using random PCR in combination with next-generation sequencing. Samples were collected from American mink (Neovison vison), European mink (Mustela lutreola), European polecat (Mustela putorius), European pine marten (Martes martes), stone marten (Martes foina), Eurasian otter (Lutra lutra) and Eurasian badger (Meles meles) of the family of Mustelidae; common genet (Genetta genetta) of the family of Viverridae; red fox (Vulpes vulpes) of the family of Canidae and European wild cat (Felis silvestris) of the family of Felidae. RESULTS: A number of sequences of possible novel viruses or virus variants were detected, including a theilovirus, phleboviruses, an amdovirus, a kobuvirus and picobirnaviruses. CONCLUSIONS: Using random PCR in combination with next generation sequencing, sequences of various novel viruses or virus variants were detected in fecal samples collected from Spanish carnivores. Detected novel viruses highlight the viral diversity that is present in fecal material of wild carnivores.
has issue date	2014-05-15(xsd:dateTime)
bibo:doi	10.1186/1743-422x-11-89
bibo:pmid	24886057
has license	cc-by
sha1sum (hex)	36def2d37441d9ab0833ba1a1a48c68184bae246
schema:url	https://doi.org/10.1186/1743-422x-11-89
resource representing a document's title	Viral metagenomic analysis of feces of wild small carnivores
has PubMed Central identifier	PMC4030737
has PubMed identifier	24886057
schema:publication	Virol J
resource representing a document's body	covid:36def2d37441d9ab0833ba1a1a48c68184bae246#body_text
is http://vocab.deri.ie/void#inDataset of	https://covidontheweb.inria.fr:4443/about/id/http/ns.inria.fr/covid19/36def2d37441d9ab0833ba1a1a48c68184bae246
is schema:about of	named entity 'METHODS' named entity 'VIRUSES' named entity 'AMERICAN MINK' named entity 'MARTES' named entity 'DOMESTIC ANIMALS' named entity 'THESE' named entity 'DEMONSTRATED' named entity 'MELES' named entity 'WILDLIFE' named entity 'VULPES' named entity 'BACKGROUND' named entity 'NORTHERN' named entity 'VIRAL' named entity 'CARNIVORES' named entity 'GENETTA' named entity 'FELIDAE' named entity 'WILD' named entity 'USING' named entity 'FAMILY' named entity 'VIVERRIDAE' named entity 'family' named entity 'Eurasian otter' named entity 'Viral' named entity 'CARNIVORES' named entity 'DIFFERENT' named entity 'RED FOX' named entity 'SPECIES' named entity 'COLLECTED' named entity 'WILD CAT' named entity 'EUROPEAN MINK' named entity 'COMMON' named entity 'PUTORIUS' named entity 'SAMPLES' named entity 'EXPANSION' named entity 'MUSTELIDAE' named entity 'EUROPEAN POLECAT' named entity 'STUDY' named entity 'SMALL' named entity 'RANDOM PCR' named entity 'NEXT-GENERATION SEQUENCING' named entity 'PINE' named entity 'COMBINATION' named entity 'VIRUS' named entity 'WILD ANIMALS' named entity 'POTENTIAL' named entity 'VIRAL' named entity 'ANALYSIS' named entity 'WILD' named entity 'STONE' named entity 'CANIDAE' named entity 'EUROPEAN' named entity 'OTTER' named entity 'BADGER' named entity 'GENET' named entity 'LUTRA' named entity 'STUDIES' named entity 'REQUIRED' named entity 'HUMANS' named entity 'FECAL' named entity 'FECES' named entity 'SMALL' named entity 'RECENT' named entity 'TRANSMISSION' named entity 'PRESENT' named entity 'EVALUATED' named entity 'HAVE' named entity 'OUR' named entity 'KNOWLEDGE' named entity 'SPAIN' named entity 'DIVERSITY' named entity 'MARTEN' named entity 'PART OF' covid:arg/36def2d37441d9ab0833ba1a1a48c68184bae246 named entity 'family'

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