About: Agricultural and geographic factors shaped the North American 2015 highly pathogenic avian influenza H5N2 outbreak

Facets (new session)
Description
Metadata
Settings
- owl:sameAs
- Inference Rule:

About: Agricultural and geographic factors shaped the North American 2015 highly pathogenic avian influenza H5N2 outbreak Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Agricultural and geographic factors shaped the North American 2015 highly pathogenic avian influenza H5N2 outbreak
Creator	Lee, Dong-Hun Bahlid, Justin Duvvuri Id, Venkata Hicks Id, Joseph Swayneid, David Torchetti, Mia
Source	PMC
abstract	The 2014–2015 highly pathogenic avian influenza (HPAI) H5NX outbreak represents the largest and most expensive HPAI outbreak in the United States to date. Despite extensive traditional and molecular epidemiological studies, factors associated with the spread of HPAI among midwestern poultry premises remain unclear. To better understand the dynamics of this outbreak, 182 full genome HPAI H5N2 sequences isolated from commercial layer chicken and turkey production premises were analyzed using evolutionary models able to accommodate epidemiological and geographic information. Epidemiological compartmental models embedded in a phylogenetic framework provided evidence that poultry type acted as a barrier to the transmission of virus among midwestern poultry farms. Furthermore, after initial introduction, the propagation of HPAI cases was self-sustainable within the commercial poultry industries. Discrete trait diffusion models indicated that within state viral transitions occurred more frequently than inter-state transitions. Distance and sample size were very strongly supported as associated with viral transition between county groups (Bayes Factor > 30.0). Together these findings indicate that the different types of midwestern poultry industries were not a single homogenous population, but rather, the outbreak was shaped by poultry industries and geographic factors.
has issue date	2020-01-21(xsd:dateTime)
bibo:doi	10.1371/journal.ppat.1007857
bibo:pmid	31961906
has license	cc0
sha1sum (hex)	4363936c1edadc4d1a30103f0dba198354b16051
schema:url	https://doi.org/10.1371/journal.ppat.1007857
resource representing a document's title	Agricultural and geographic factors shaped the North American 2015 highly pathogenic avian influenza H5N2 outbreak
has PubMed Central identifier	PMC7004387
has PubMed identifier	31961906
schema:publication	PLoS Pathog
resource representing a document's body	covid:4363936c1edadc4d1a30103f0dba198354b16051#body_text
is schema:about of	named entity 'outbreak' named entity 'highly' named entity 'models' named entity 'remain' named entity 'poultry industries' named entity 'pathogenic' named entity 'H5N2' covid:arg/4363936c1edadc4d1a30103f0dba198354b16051 named entity 'TRANSITION' named entity 'POPULATION' named entity 'COUNTY' named entity 'GEOGRAPHIC' named entity 'EPIDEMIOLOGICAL' named entity 'DATE' named entity 'ASSOCIATED WITH' named entity 'INDICATED' named entity 'TYPES' named entity 'HOMOGENOUS' named entity 'RATHER' named entity 'OUTBREAK' named entity 'SINGLE' named entity 'EPIDEMIOLOGICAL STUDIES' named entity 'SEQUENCES' named entity 'SAMPLE SIZE' named entity 'SUPPORTED' named entity 'ANALYZED' named entity 'SPREAD' named entity 'DISTANCE' named entity 'TRANSMISSION OF VIRUS' named entity 'PROPAGATION' named entity 'EVIDENCE' named entity 'CHICKEN' named entity 'INITIAL' named entity 'FARMS' named entity 'INTER-' named entity 'INTRODUCTION' named entity 'LAYER' named entity 'MODELS' named entity 'TRADITIONAL' named entity 'INFORMATION' named entity 'PRODUCTION' named entity 'STATE' named entity 'UNCLEAR' named entity 'FINDINGS' named entity '2015' named entity 'GROUPS' named entity 'POULTRY' named entity 'SUSTAINABLE' named entity 'TRAIT' named entity 'HIGHLY PATHOGENIC AVIAN INFLUENZA' named entity 'USING' named entity 'TYPE' named entity 'AGRICULTURAL' named entity 'HIGHLY PATHOGENIC AVIAN INFLUENZA' named entity 'OCCURRED' named entity 'PROVIDED' named entity 'EXTENSIVE' named entity 'COMMERCIAL' named entity 'CASES' named entity 'HPAI' named entity 'SHAPED' named entity 'OUTBREAK' named entity 'ISOLATED' named entity 'DIFFERENT' named entity 'NORTH AMERICAN' named entity 'SHAPED' named entity 'BUT' named entity 'DIFFUSION MODELS' named entity 'BETTER' named entity 'FREQUENTLY' named entity 'LARGEST' named entity 'INDUSTRIES' named entity 'DYNAMICS' named entity '2015' named entity 'GEOGRAPHIC' named entity 'THESE'

Faceted Search & Find service v1.13.91 as of Mar 24 2020

Alternative Linked Data Documents: Sponger | ODE Content Formats:

RDF

ODATA

Microdata

About

OpenLink Virtuoso version 07.20.3229 as of Jul 10 2020, on Linux (x86_64-pc-linux-gnu), Single-Server Edition (94 GB total memory)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2024 OpenLink Software