About: Comparative genome analysis and molecular epidemiology of the reemerging porcine epidemic diarrhea virus strains isolated in Korea

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About: Comparative genome analysis and molecular epidemiology of the reemerging porcine epidemic diarrhea virus strains isolated in Korea Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Comparative genome analysis and molecular epidemiology of the reemerging porcine epidemic diarrhea virus strains isolated in Korea
Creator	Lee, Joong-Bok Lee, Dong-Hun Choi, In-Soo Park, Seung-Yong Song, Chang-Seon Choi, Jong-Chul Lee, Kun-Kyu Lee, Sang-Won Ho Pi, Jae
Source	Elsevier; Medline; PMC
abstract	Porcine epidemic diarrhea virus (PEDV), a member of the Coronaviridae family, is an enveloped, positive-sense, single-stranded RNA virus, which causes severe diarrhea and dehydration in suckling pigs. We detected three PEDV strains from ten small intestine samples from piglets with acute diarrhea and we determined the complete genome sequences of the reemerging Korean PEDV field isolates, except for the noncoding regions from both ends. The complete genome sequences of the strains were identical or almost identical (one synonymous single-nucleotide polymorphism (SNP) in the ORF1a/1b genomic sequence). Interestingly, comparative genome analysis of recent Korean PEDV isolates and other strains revealed that the complete genome sequences of recent Korean strains were almost identical (99.9%) to those of the US PEDV strains isolated in 2013. These results suggest that the three reemerging Korean strains are distinct from previous endemic Korean PEDV strains and has been recently introduced into Korea from oversea with high likelihood.
has issue date	2014-06-19(xsd:dateTime)
bibo:doi	10.1016/j.meegid.2014.06.005
bibo:pmid	24954514
has license	no-cc
sha1sum (hex)	58b03ddec1bad21055ed4ca08df9ad08f9fd650c
schema:url	https://doi.org/10.1016/j.meegid.2014.06.005
resource representing a document's title	Comparative genome analysis and molecular epidemiology of the reemerging porcine epidemic diarrhea virus strains isolated in Korea
has PubMed Central identifier	PMC7106004
has PubMed identifier	24954514
schema:publication	Infect Genet Evol
resource representing a document's body	covid:58b03ddec1bad21055ed4ca08df9ad08f9fd650c#body_text
is schema:about of	named entity 'identical' named entity 'single-nucleotide polymorphism' named entity 'Korean' named entity 'regions' named entity 'Comparative' named entity 'strains' named entity 'MOLECULAR EPIDEMIOLOGY' named entity 'ACUTE DIARRHEA' named entity 'KOREAN' named entity 'DETERMINED' named entity 'HIGH' covid:arg/58b03ddec1bad21055ed4ca08df9ad08f9fd650c named entity 'ENDEMIC' named entity 'DETECTED' named entity 'FAMILY' named entity 'REGIONS' named entity 'SINGLE-NUCLEOTIDE POLYMORPHISM' named entity 'PREVIOUS' named entity 'SMALL INTESTINE' named entity 'ISOLATES' named entity 'ALMOST' named entity 'INTRODUCED INTO' named entity 'PORCINE EPIDEMIC DIARRHEA VIRUS' named entity 'ISOLATED' named entity '2899' named entity 'KOREA' named entity 'COMPARATIVE GENOME' named entity 'STRAINS' named entity 'CAUSES' named entity 'RECENTLY' named entity 'SYNONYMOUS' named entity 'COMPLETE' named entity 'THESE' named entity 'STRAINS' named entity 'DEHYDRATION' named entity 'CORONAVIRIDAE' named entity 'COMPARATIVE GENOME' named entity 'EXCEPT FOR' named entity 'DISTINCT FROM' named entity 'GENOME' named entity 'FIELD' named entity 'LIKELIHOOD' named entity 'RESULTS' named entity 'GENOME ANALYSIS' named entity 'PORCINE EPIDEMIC DIARRHEA VIRUS' named entity 'SEVERE DIARRHEA' named entity 'PIGS' named entity 'KOREA' named entity 'RNA VIRUS' named entity 'SINGLE-STRANDED RNA' named entity 'RECENT' named entity 'ENDS' named entity 'SEQUENCES' named entity 'GENOME ANALYSIS' named entity 'MEMBER OF' named entity 'GENOMIC SEQUENCE' named entity 'SAMPLES' named entity 'IDENTICAL' named entity 'ISOLATED' named entity 'REVEALED' named entity 'SUGGEST' named entity 'field' named entity 'suckling' named entity 'strains' named entity 'Korean' named entity 'enveloped' named entity 'severe' named entity 'Porcine epidemic diarrhea virus' named entity 'single-stranded RNA' named entity 'PEDV' named entity 'PEDV' named entity 'Korea' named entity 'virus'

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