About: Identification and genomic characterization of a novel CRESS DNA virus from a calf with severe hemorrhagic enteritis in China

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About: Identification and genomic characterization of a novel CRESS DNA virus from a calf with severe hemorrhagic enteritis in China Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
title	Identification and genomic characterization of a novel CRESS DNA virus from a calf with severe hemorrhagic enteritis in China
Creator	Tang, Cheng Yue, Hua Zhang, Bin Guo, Zijing He, Qifu
source	Elsevier; Medline; PMC
abstract	Abstract In this study, a novel circular replication-associated protein (Rep)-encoding single stranded (CRESS) DNA virus was discovered in diarrheic sample of a calf with severe hemorrhagic enteritis. The virus, named Bo-Circo-like virus CH, has a circular genome with 3909 nucleotides (nt). Six putative open reading frames (ORFs) were identified, including Rep, capsid (Cap) and four proteins of unknown function. Both the genome size and the number as well as the organization of encoded ORFs, Bo-Circo-like virus CH is most closely related to Po-Circo-like virus 21 detected in pig faeces. A preliminary survey using specific primers for the Rep region showed that 5.3% (4/75) of diarrheic samples were positive for Bo-Circo-like virus, and all 42 healthy samples were negative. In conclusion, our results indicate that Bo-Circo-like virus CH may represent a new virus in bovine. Further investigation is needed to determine the relationship between the virus infection and diarrhea.
has issue date	2018-08-15(xsd:dateTime)
bibo:doi	10.1016/j.virusres.2018.07.015
bibo:pmid	30040978
has license	els-covid
sha1sum (hex)	597252f9c641dc8db56ba4132d0edcbff9c50ee6
schema:url	https://doi.org/10.1016/j.virusres.2018.07.015
resource representing a document's title	Identification and genomic characterization of a novel CRESS DNA virus from a calf with severe hemorrhagic enteritis in China
has PubMed Central identifier	PMC7114660
has PubMed identifier	30040978
schema:publication	Virus Research
resource representing a document's body	covid:597252f9c641dc8db56ba4132d0edcbff9c50ee6#body_text
is schema:about of	named entity 'NOVEL' named entity 'CALF' named entity 'virus' named entity 'Identification' named entity 'REP' named entity 'CAPSID' named entity 'SINGLE' named entity 'LIKE' named entity 'PROTEINS' named entity 'PROTEIN ' named entity 'CALF' named entity 'NUCLEOTIDES' named entity 'STUDY' named entity 'HEALTHY' named entity 'VIRUS' named entity 'PRELIMINARY' named entity 'SAMPLES' named entity 'BO-CIRCO-LIKE VIRUS CH' named entity 'DNA VIRUS' named entity 'OPEN READING FRAMES' named entity 'NUMBER' named entity 'PRIMERS' named entity 'ORFS' named entity 'USING' named entity 'FAECES' named entity 'GENOME SIZE' named entity 'DETECTED' named entity 'IDENTIFICATION' named entity 'NEGATIVE' named entity 'PIG' named entity 'NOVEL' named entity 'RELATED' named entity 'SURVEY' named entity 'SEVERE' named entity '5.3' named entity 'IDENTIFIED' named entity 'POSITIVE FOR' named entity 'DNA VIRUS' named entity 'HEMORRHAGIC ENTERITIS' named entity 'CRESS' named entity 'NAMED' named entity 'FUNCTION' named entity 'ENCODING' named entity 'HEMORRHAGIC ENTERITIS' named entity 'REPLICATION' named entity 'SEVERE' named entity 'CIRCULAR' named entity 'REGION' named entity 'SPECIFIC' named entity 'GENOME' named entity 'INCLUDING' named entity 'UNKNOWN' named entity 'ASSOCIATED' named entity 'ORGANIZATION' named entity 'CHARACTERIZATION' named entity 'GENOMIC' named entity 'CHINA' named entity 'ENCODED' named entity 'SAMPLE' covid:arg/597252f9c641dc8db56ba4132d0edcbff9c50ee6 named entity 'virus' named entity 'virus' named entity 'negative' named entity 'samples' named entity 'pig' named entity 'hemorrhagic' named entity 'nucleotides' named entity 'genome size' named entity 'circular genome' named entity 'virus' named entity 'ORFs' named entity 'virus' named entity 'virus' named entity 'ORFs' named entity 'open reading frames' named entity 'unknown function' named entity 'bovine'

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