About: An insect picornavirus may have genome organization similar to that of caliciviruses

Facets (new session)
Description
Metadata
Settings
- owl:sameAs
- Inference Rule:

About: An insect picornavirus may have genome organization similar to that of caliciviruses Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	An insect picornavirus may have genome organization similar to that of caliciviruses
Creator	Gorbalenyab, Alexander Komin, Eugene
Source	PMC
abstract	Computer‐assisted analysis of the amino acid sequence of the product encoded by the sequenced 3′ portion of the cricket paralysis virus (CrPV), an insect picornavirus, genome showed that this protein is homologous not to the RNA‐directed RNA polymerases, as originally suggested, but to the capsid proteins of mammalian picornaviruses. Alignment of the CrPV protein sequence with those of picornavirus and calicivirus capsid proteins demonstrated that the sequenced portion of the insect picornavirus genome encodes the C‐terminal part of VP3 and the entire VP1. Thus CrPV seems to have a genome organization distinct from that of other picornaviruses but closely resembling that of caliciviruses, with the capsid proteins encoded in the 3′ part of the genome. On the other hand, the tentative phylogenetic trees generated from the VP3 alignment revealed grouping of CrPV with hepatitis A virus, a true picornavirus, not with caliciviruses. Thus CrPV may be a picornavirus with a calicivirus‐like genome organization. Different options for CrPV genome expression are discussed.
has issue date	1992-02-03(xsd:dateTime)
bibo:doi	10.1016/0014-5793(92)80332-b
bibo:pmid	1551442
has license	no-cc
sha1sum (hex)	5b7c0cc1edbdaea9d8a616df8db5a0a40393d1e1
schema:url	https://doi.org/10.1016/0014-5793%2892%2980332-b
resource representing a document's title	An insect picornavirus may have genome organization similar to that of caliciviruses
has PubMed Central identifier	PMC7164100
has PubMed identifier	1551442
schema:publication	FEBS Lett
resource representing a document's body	covid:5b7c0cc1edbdaea9d8a616df8db5a0a40393d1e1#body_text
is schema:about of	named entity 'HEPATITIS A VIRUS' named entity 'OTHER PICORNAVIRUSES' named entity 'DEMONSTRATED' named entity 'REVEALED' named entity 'OPTIONS' named entity 'COMPUTER' named entity 'protein sequence' named entity 'amino acid sequence' named entity 'RNA' named entity 'CrPV' named entity 'cricket paralysis virus' named entity 'calicivirus' named entity 'capsid proteins' named entity 'genome' named entity 'covalently linked' named entity 'picornaviruses' named entity 'picornaviruses' named entity 'picornavirus' named entity 'calicivirus' named entity 'phylogenetic analysis' named entity 'capsid proteins' named entity 'picornavirus' named entity 'virions' named entity 'polymerase' named entity 'picornavirus' named entity 'substantial similarity' named entity 'caliciviruses' named entity 'genome' named entity 'radiolabelling' named entity 'evolutionary rate' named entity 'picornavirus' named entity 'virus' named entity 'subgenomic RNA' named entity 'RNA viruses' named entity 'RNA' named entity 'protein precursor' named entity 'Swissprot' named entity 'genome replication' named entity 'CrPV' named entity 'CrPV' named entity 'phylogenetic' named entity 'RNA' named entity 'VP3' named entity 'polyprotein' named entity 'CrPV' named entity 'proteolytic processing' named entity 'picornaviruses' named entity 'homologous' named entity 'phylogenetic position' named entity 'polypeptide' named entity 'polyprotein' named entity 'capsid proteins' named entity 'ribosome' named entity 'structural domains' named entity 'CrPV' named entity 'virus' named entity 'genome' named entity 'CrPV' named entity 'positive strand RNA viruses' named entity 'RNA' named entity 'A.E.G.' named entity 'CrPV' named entity 'picornavirus' named entity 'algorithm' named entity 'CrPV' named entity 'poliovirus' named entity 'kDa' named entity 'viral capsid proteins' named entity 'virus species' named entity 'RNA helicases' named entity 'database' named entity 'deletions' named entity 'HAV' named entity 'CrPV' named entity 'C-terminal' named entity 'VP1' named entity 'genome' named entity 'RNA virus' named entity 'Phylogenetic analysis' named entity 'protease'

Faceted Search & Find service v1.13.91 as of Mar 24 2020

Alternative Linked Data Documents: Sponger | ODE Content Formats:

RDF

ODATA

Microdata

About

OpenLink Virtuoso version 07.20.3229 as of Jul 10 2020, on Linux (x86_64-pc-linux-gnu), Single-Server Edition (94 GB total memory)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2024 OpenLink Software