About: Genetic characterization of the first chiropteran papillomavirus, isolated from a basosquamous carcinoma in an Egyptian fruit bat: The Rousettus aegyptiacus papillomavirus type 1

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About: Genetic characterization of the first chiropteran papillomavirus, isolated from a basosquamous carcinoma in an Egyptian fruit bat: The Rousettus aegyptiacus papillomavirus type 1 Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Genetic characterization of the first chiropteran papillomavirus, isolated from a basosquamous carcinoma in an Egyptian fruit bat: The Rousettus aegyptiacus papillomavirus type 1
Creator	Van Ranst, Marc Kiupel, Matti Rector, Annabel Mostmans, Sara Van Doorslaer, Koenraad Maes, Roger Mcknight, Christy Van, ( Wise, Annabel
topic	covid:765e48fe5e2a88dc5d90218b231e72f52bffede9#this
Source	Elsevier; Medline; PMC
abstract	The complete genomic DNA of a novel papillomavirus (PV) was isolated from a basosquamous carcinoma on the wing of an Egyptian fruit bat (Rousettus aegyptiacus). Initial short sequences of the E1 and L1 genes of this virus were retrieved by PCR with degenerate papillomavirus-specific primers, and the entire R. aegyptiacus papillomavirus type 1 (RaPV-1) DNA was then amplified by long template PCR, cloned and sequenced with a transposon insertion method. The RaPV-1 genome counts 7970 basepairs and contains the typical papillomavirus open reading frames (ORF) (E1, E2, E4, E6, E7, L1 and L2). Based on a concatenated alignment of the E1, E2, L1 and L2 open reading frames of RaPV-1 and 46 other human and animal papillomavirus type species, a neighbor-joining phylogenetic tree was constructed. This phylogenetic analysis shows that RaPV-1 has a close-to-root position in the papillomavirus evolutionary tree. Since RaPV-1 is only distantly related to other papillomaviruses (with maximally 50% nucleotide sequence identity across the L1 open reading frame), it cannot be assigned to one of the existing papillomavirus genera and therefore represents the first member of a novel, as yet unnamed, close-to-root papillomavirus genus. This is the first time a papillomavirus has been isolated and characterized from a member of the Chiroptera order.
has issue date	2006-10-31(xsd:dateTime)
bibo:doi	10.1016/j.vetmic.2006.06.010
bibo:pmid	16854536
has license	no-cc
sha1sum (hex)	765e48fe5e2a88dc5d90218b231e72f52bffede9
schema:url	https://doi.org/10.1016/j.vetmic.2006.06.010
resource representing a document's title	Genetic characterization of the first chiropteran papillomavirus, isolated from a basosquamous carcinoma in an Egyptian fruit bat: The Rousettus aegyptiacus papillomavirus type 1
has PubMed Central identifier	PMC7127635
has PubMed identifier	16854536
schema:publication	Vet Microbiol
resource representing a document's body	covid:765e48fe5e2a88dc5d90218b231e72f52bffede9#body_text
is http://vocab.deri.ie/void#inDataset of	proxy:http/ns.inria.fr/covid19/765e48fe5e2a88dc5d90218b231e72f52bffede9
is schema:about of	named entity 'short' named entity 'evolutionary tree' named entity 'Initial' named entity 'INITIAL' named entity 'ANIMAL' named entity 'OPEN READING FRAMES' named entity 'VIRUS' named entity 'NEIGHBOR' named entity 'PAPILLOMAVIRUSES' named entity 'THE WING' named entity 'RELATED' named entity 'CLONED' named entity 'PHYLOGENETIC TREE' named entity 'ORDER' named entity 'SEQUENCES' named entity 'PRIMERS' named entity 'SPECIES' named entity '50%' named entity 'TIME' named entity 'INSERTION' named entity 'TYPICAL' named entity 'HUMAN' named entity 'BAT' named entity 'GENOME' named entity 'CHIROPTERA' named entity 'COUNTS' named entity 'BASOSQUAMOUS CARCINOMA' named entity 'ROOT POSITION' named entity 'ACROSS' named entity 'CONSTRUCTED' named entity 'ONE OF' named entity 'BASED' named entity 'GENES' named entity 'TYPE 1' named entity 'LONG' named entity 'SPECIFIC' named entity 'ISOLATED' named entity 'DEGENERATE' named entity 'METHOD' named entity 'EGYPTIAN' named entity 'JOINING' named entity 'GENOMIC DNA' named entity 'ROOT' named entity 'TRANSPOSON' named entity 'NUCLEOTIDE SEQUENCE' named entity 'TREE' named entity 'ASSIGNED' named entity 'AMPLIFIED' named entity 'ENTIRE' named entity 'FIRST MEMBER' named entity 'PCR' named entity 'PHYLOGENETIC ANALYSIS' named entity 'TYPE' named entity 'CLOSETO' named entity 'COMPLETE' named entity 'TEMPLATE' named entity 'DNA' named entity 'DISTANTLY' named entity 'FRUIT' named entity 'ALIGNMENT' named entity 'GENUS' named entity 'SEQUENCE IDENTITY' named entity 'PAPILLOMAVIRUS' named entity 'SHORT' named entity 'CONTAINS' named entity 'CHARACTERIZED' named entity 'CLOSE' named entity 'OPEN READING FRAME' named entity 'NOVEL' named entity 'MEMBER OF' covid:arg/765e48fe5e2a88dc5d90218b231e72f52bffede9

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