About: The interactions between proteins and membranes play critical roles in signal transduction, cell motility, and transport, and they are involved in many types of diseases. Molecular dynamics (MD) simulations have greatly contributed to our understanding of protein–membrane interactions, promoted by a dramatic development of MD-related software, increasingly accurate force fields, and available computer power. In this chapter, we present available methods for studying protein–membrane systems with MD simulations, including an overview about the various all-atom and coarse-grained force fields for lipids, and useful software for membrane simulation setup and analysis. A large set of case studies is discussed.

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About: The interactions between proteins and membranes play critical roles in signal transduction, cell motility, and transport, and they are involved in many types of diseases. Molecular dynamics (MD) simulations have greatly contributed to our understanding of protein–membrane interactions, promoted by a dramatic development of MD-related software, increasingly accurate force fields, and available computer power. In this chapter, we present available methods for studying protein–membrane systems with MD simulations, including an overview about the various all-atom and coarse-grained force fields for lipids, and useful software for membrane simulation setup and analysis. A large set of case studies is discussed. Goto Sponge NotDistinct Permalink

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type	abstract
value	The interactions between proteins and membranes play critical roles in signal transduction, cell motility, and transport, and they are involved in many types of diseases. Molecular dynamics (MD) simulations have greatly contributed to our understanding of protein–membrane interactions, promoted by a dramatic development of MD-related software, increasingly accurate force fields, and available computer power. In this chapter, we present available methods for studying protein–membrane systems with MD simulations, including an overview about the various all-atom and coarse-grained force fields for lipids, and useful software for membrane simulation setup and analysis. A large set of case studies is discussed.
subject	Proteomics Signal transduction Molecular modelling Molecular dynamics Neurochemistry Scientific modeling Computational chemistry Quantum chemistry
part of	Computer simulations of protein–membrane systems
is abstract of	Computer simulations of protein–membrane systems
is hasSource of	covid:ann/target/33ee43f85cfd27802f2468e1a3bc48f159dde407 covid:ann/target/9be7353e1d736c35cc87ab9bfa0eeec2bb5be3f5 covid:ann/target/2a650db3c9218016f25e805533b82f61e09b03cd covid:ann/target/ff4c49fa86b1677580302c257dc591523bb5a173

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