About: Laboratory information system requirements to manage the COVID-19 pandemic: a report from the Belgian national reference testing center

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About: Laboratory information system requirements to manage the COVID-19 pandemic: a report from the Belgian national reference testing center Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Laboratory information system requirements to manage the COVID-19 pandemic: a report from the Belgian national reference testing center
Creator	Beuselinck, Kurt Desmet, Stefanie Lagrou, Katrien Cuypers, Lize Ranst, Marc André, Emmanuel Depypere, Melissa Houben, Els Van Elslande, Jan Bruyninckx, Katrien Goossens, Ria Goveia, Jermaine Hoet, Katrien Jeuris, Kirsten Laenen, Lies Martens, Steven Verdonck, Ann Weemaes, Matthias Welkenhuysen, Joris Wouters, Stijn
Source	Medline; PMC
abstract	OBJECTIVE: To describe the development, implementation and requirements of laboratory information system (LIS) functionality to manage test ordering, registration, sample flow, and result reporting during the COVID-19 pandemic. CONTEXT AND SETTING: Our large (>12,000,000 tests/year) academic hospital laboratory is the Belgian National Reference Center (NRC) for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) testing. We performed a moving total of > 25,000 SARS-CoV-2 PCR tests in parallel to standard routine testing since the start of the outbreak. A LIS implementation team dedicated to develop tools to remove the bottlenecks, primarily situated in the pre- and post-analytical phase, was established early in the crisis. RESULTS: We outline the design, implementation and requirements of LIS functionality related to managing increased test demand during the COVID-19 crisis, including tools for test ordering, standardized order sets integrated into a computerized provider order entry module, notifications on shipping requirements, automated triaging based on digital metadata forms, and the establishment of databases with contact details of other laboratories and primary care physicians to enable automated reporting. We also describe our approach to data mining and reporting of actionable daily summary statistics to governing bodies and other policymakers. DISCUSSION: Rapidly developed, agile extendable LIS functionality and its meaningful use alleviates the administrative burden on laboratory personnel and improves turn-around-time of SARS-CoV-2 testing. It will be important to maintain an environment that is conducive for the rapid adoption of meaningful LIS tools post-COVID crisis.
has issue date	2020-04-29(xsd:dateTime)
bibo:doi	10.1093/jamia/ocaa081
bibo:pmid	32348469
has license	cc-by-nc
sha1sum (hex)	8eb5fba2b7c8dc5f552903ea4b353f0c614dc986
schema:url	https://doi.org/10.1093/jamia/ocaa081
resource representing a document's title	Laboratory information system requirements to manage the COVID-19 pandemic: a report from the Belgian national reference testing center
has PubMed Central identifier	PMC7197526
has PubMed identifier	32348469
schema:publication	J Am Med Inform Assoc
resource representing a document's body	covid:8eb5fba2b7c8dc5f552903ea4b353f0c614dc986#body_text
is schema:about of	named entity 'RESULT' named entity 'REQUIREMENTS' named entity 'ORDERING' named entity 'MANAGE' covid:arg/8eb5fba2b7c8dc5f552903ea4b353f0c614dc986 named entity 'LIS' named entity 'sample' named entity 'COVID-19 pandemic' named entity 'infectious disease' named entity 'COVID' named entity 'recession' named entity 'administrative burden' named entity 'computerized provider order entry' named entity 'Sciensano' named entity 'CPOE' named entity 'increased exponentially' named entity 'April 2020' named entity 'SARS-CoV-2' named entity 'administrative burden' named entity 'socioeconomic' named entity 'LIS' named entity 'bioinformatician' named entity 'EVIDENCE-BASED' named entity 'CPOE' named entity 'Belgium' named entity 'COVID-19 outbreak' named entity 'serological testing' named entity 'COVID' named entity 'PDF' named entity 'emergency departments' named entity 'infectious diseases' named entity 'health care professionals' named entity 'population immunity' named entity 'CPOE' named entity 'clinical management' named entity 'LIS' named entity 'automation' named entity 'white blood cell count' named entity 'LIS' named entity 'Belgium' named entity 'LIS' named entity 'policy makers' named entity 'epidemiological' named entity 'SARS-CoV-2' named entity 'emergency departments' named entity 'data visualization' named entity 'clinical laboratories' named entity 'biomedical science' named entity 'LIS' named entity 'pathogens' named entity 'LIS' named entity 'isolation units' named entity 'laboratory information systems' named entity 'clinical laboratory' named entity 'database' named entity 'LIS' named entity 'SARS' named entity 'COVID-19 test' named entity 'epidemiological studies' named entity 'electronic health record' named entity 'LIS' named entity 'COVID-19'

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