About: Embryonic expression patterns of Eukaryotic EndoU ribonuclease family gene endouC in zebrafish

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About: Embryonic expression patterns of Eukaryotic EndoU ribonuclease family gene endouC in zebrafish Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Embryonic expression patterns of Eukaryotic EndoU ribonuclease family gene endouC in zebrafish
Creator	Tsai, Huai-Jen Fu, Chuan-Yang Lee, Hung-Chieh Zeng, Chih-Wei
Source	Elsevier; Medline; PMC
abstract	Endou proteins belong to the Eukaryotic EndoU ribonuclease family of enzymes that present high sequence homology with the founding member XendoU domain. The enzymatic activity and three-dimensional structure of some Endou proteins have been previously reported. However, their molecular structure and gene expression patterns during embryogenesis remain to be elucidated. Therefore, we took zebrafish (Danio rerio) endouC as the model to study molecular structure and gene expression dynamics at different developmental stages. Zebrafish endouC cDNA contains 930 base pairs encoding 309 amino acid residues, sharing 27%, 27%, 27%, and 25% identity with that of human, mouse, chicken and frog, respectively. A phylogenetic tree showed that zebrafish EndouA was clustered with vertebrate Endou groups, while zebrafish EndouB and EndouC were found to belong to a unique monophyletic group. Furthermore, the endouC transcript was detected in one-cell embryos, suggesting that it is a maternal gene. While the endouC transcript was only weakly present at early developmental stages, its expression was greatly increased in embryos from 18 to 48 h post-fertilization (hpf) and then decreased after 72 hpf. Finally, endouC was ubiquitously expressed throughout the whole embryo during early embryogenesis, but its expression was enriched in brain, eyes and fin buds from 24 to 96 hpf.
has issue date	2017-06-10(xsd:dateTime)
bibo:doi	10.1016/j.gep.2017.06.003
bibo:pmid	28610924
has license	no-cc
sha1sum (hex)	91a27c0a3a3ae3d932c2e154ec9a672a0e97631d
schema:url	https://doi.org/10.1016/j.gep.2017.06.003
resource representing a document's title	Embryonic expression patterns of Eukaryotic EndoU ribonuclease family gene endouC in zebrafish
has PubMed Central identifier	PMC7118454
has PubMed identifier	28610924
schema:publication	Gene Expr Patterns
resource representing a document's body	covid:91a27c0a3a3ae3d932c2e154ec9a672a0e97631d#body_text
is schema:about of	named entity 'CONTAINS' named entity 'BASE PAIRS' named entity 'ENDOUC' named entity 'MEMBER' named entity 'CLUSTERED' named entity 'EXPRESSION' named entity 'PATTERNS' named entity 'DIFFERENT' named entity 'GREATLY' named entity 'SHARING' named entity 'POST' named entity 'PRESENT' named entity 'EYES' named entity 'DEVELOPMENTAL STAGES' named entity 'PHYLOGENETIC TREE' named entity 'INCREASED' named entity 'early' named entity 'molecular structure' named entity 'zebrafish' named entity 'enzymatic activity' named entity 'gene' named entity 'Eukaryotic' named entity 'ZEBRAFISH' named entity 'BUT' named entity 'MODEL' named entity 'EMBRYONIC' named entity 'ZEBRAFISH' named entity 'RIBONUCLEASE' named entity 'FAMILY' named entity 'PATTERNS' named entity 'ENRICHED' named entity 'CELL EMBRYOS' named entity 'HUMAN' named entity 'FERTILIZATION' named entity 'AMINO ACID' named entity 'UNIQUE' named entity 'DYNAMICS' named entity 'PROTEINS' named entity 'ENZYMATIC ACTIVITY' named entity 'EUKARYOTIC' named entity 'GROUP' named entity 'STRUCTURE' named entity 'REPORTED' named entity 'MOUSE' named entity 'STUDY' named entity 'EARLY' named entity 'GENE' named entity 'HIGH' named entity 'ENDOU' named entity 'EXPRESSION' named entity 'EUKARYOTIC' named entity 'EXPRESSED' named entity 'FIN BUDS' named entity 'MONOPHYLETIC' named entity 'ENDOUB' named entity 'THEIR' named entity 'DETECTED' named entity 'IDENTITY' named entity 'CHICKEN' named entity 'CDNA' named entity 'BRAIN' named entity 'FAMILY' named entity 'ENCODING' named entity 'EARLY EMBRYOGENESIS' named entity 'EMBRYOGENESIS' named entity 'FROG' named entity 'GENE EXPRESSION' named entity 'HPF' named entity 'RIBONUCLEASE' named entity 'EMBRYOS' named entity 'GENE' named entity 'ENDOUC' named entity 'HAVE' named entity 'DOMAIN' named entity '930' named entity 'ENDOU' named entity 'DECREASED' named entity 'GROUPS'

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