About: Genome Characterization of a Pathogenic Porcine Rotavirus B Strain Identified in Buryat Republic, Russia in 2015

Facets (new session)
Description
Metadata
Settings
- owl:sameAs
- Inference Rule:

About: Genome Characterization of a Pathogenic Porcine Rotavirus B Strain Identified in Buryat Republic, Russia in 2015 Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
title	Genome Characterization of a Pathogenic Porcine Rotavirus B Strain Identified in Buryat Republic, Russia in 2015
Creator	Marthaler, Douglas Alekseev, Konstantin Aliper, Taras Grebennikova, Tatyana Herrera-Ibata, Diana Khametova, Kizkhalum Kotelnikov, Alexandr Mishin, Alexandr Moskvina, Anna Mukhin, Alexey Musienko, Maria Nepoklonov, Eugeny Penin, Aleksey Raev, Sergey Shepherd, Frances Verkhovsky, Oleg Yuzhakov, Anton
source	Medline; PMC
abstract	An outbreak of enteric disease of unknown etiology with 60% morbidity and 8% mortality in weaning piglets occurred in November 2015 on a farm in Buryat Republic, Russia. Metagenomic sequencing revealed the presence of rotavirus B in feces from diseased piglets while no other pathogens were identified. Clinical disease was reproduced in experimentally infected piglets, yielding the 11 RVB gene segments for strain Buryat15, with an RVB genotype constellation of G12-P[4]-I13-R4-C4-M4-A8-N10-T4-E4-H7. This genotype constellation has also been identified in the United States. While the Buryat15 VP7 protein lacked unique amino acid differences in the predicted neutralizing epitopes compared to the previously published swine RVB G12 strains, this report of RVB in Russian swine increases our epidemiological knowledge on the global prevalence and genetic diversity of RVB.
has issue date	2018-04-20(xsd:dateTime)
bibo:doi	10.3390/pathogens7020046
bibo:pmid	29677111
has license	cc-by
sha1sum (hex)	925782695d6de40cdf2d0e94622ce06d277ccf74
schema:url	https://doi.org/10.3390/pathogens7020046
resource representing a document's title	Genome Characterization of a Pathogenic Porcine Rotavirus B Strain Identified in Buryat Republic, Russia in 2015
has PubMed Central identifier	PMC6027140
has PubMed identifier	29677111
schema:publication	Pathogens
resource representing a document's body	covid:925782695d6de40cdf2d0e94622ce06d277ccf74#body_text
is schema:about of	named entity 'CHARACTERIZATION' named entity 'Pathogenic' named entity 'ROTAVIRUS B' named entity 'PATHOGENIC' named entity 'STRAIN' named entity '2015' named entity 'BURYAT REPUBLIC' named entity 'IDENTIFIED' named entity 'GENOME' named entity 'PORCINE ROTAVIRUS' named entity 'RUSSIA' named entity 'Russia' named entity 'Rotavirus' named entity 'DNA polymerase' named entity 'piglet' named entity 'inoculation' named entity 'gnotobiotic' named entity 'IL7' named entity 'piglet' named entity 'VP7' named entity 'clade' named entity 'North America' named entity 'gene' named entity 'diarrhea' named entity 'Vietnam' named entity 'viral pathogens' named entity 'RNA' named entity 'asparagine' named entity 'reassortment' named entity 'VP7' named entity 'NSP4' named entity 'genotype' named entity 'enteric disease' named entity 'GenBank' named entity 'enterocytes' named entity 'India' named entity 'Porcine' named entity 'large intestinal' named entity 'Europe' named entity 'bacterial pathogens' named entity 'Omsk' named entity 'host species' named entity 'staining' named entity 'VP7' named entity 'causative agent' named entity 'NGS' named entity 'cDNA' named entity 'NGS' named entity 'tissue culture' named entity 'November 2015' named entity 'genetic diversity' named entity 'DNA polymerase' named entity 'genetic relationship' named entity 'BLASTN' named entity 'enteric disease' named entity 'PCR' named entity 'late autumn' named entity 'clade' named entity 'PCR' named entity 'IL11' named entity 'United States' named entity 'North American' named entity 'piglet' named entity 'watery diarrhea' named entity 'Coronavirus'

Faceted Search & Find service v1.13.91 as of Mar 24 2020

Alternative Linked Data Documents: Sponger | ODE Content Formats:

RDF

ODATA

Microdata

About

OpenLink Virtuoso version 07.20.3229 as of Jul 10 2020, on Linux (x86_64-pc-linux-gnu), Single-Server Edition (94 GB total memory)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2025 OpenLink Software