About: New real time and conventional RT-PCRs for updated molecular diagnosis of infectious bronchitis virus infection (IBV) in chickens in Egypt associated with frequent co-infections with avian influenza and Newcastle Disease viruses

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About: New real time and conventional RT-PCRs for updated molecular diagnosis of infectious bronchitis virus infection (IBV) in chickens in Egypt associated with frequent co-infections with avian influenza and Newcastle Disease viruses Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
title	New real time and conventional RT-PCRs for updated molecular diagnosis of infectious bronchitis virus infection (IBV) in chickens in Egypt associated with frequent co-infections with avian influenza and Newcastle Disease viruses
Creator	Hassan, Mohamed Arafa, Abdel-Satar Grund, Christian Harder, Timm Naguib, Mahmoud El-Zanaty, Ali Lüschow, Dörte El-Kady, F Hafez, Hafez Hassan, Kareem
source	Elsevier; Medline; PMC
abstract	Abstract In Egypt, currently two geographically restricted genotypes of the infectious bronchitis coronavirus (IBV) are circulating with detrimental effects for poultry industry. A sensitive real-time RT-PCR assay targeting the IBV nucleocapsid gene (N) was developed to screen clinical samples for presence of IBV. Conventional RT-PCRs amplifying hypervariable regions (HVRs 1–2 and 3) of the IBV S1 gene were developed and amplificates used for nucleotide sequence-based typing of IBV field strains in Egyptian chickens directly from clinical samples.
has issue date	2017-07-31(xsd:dateTime)
bibo:doi	10.1016/j.jviromet.2017.02.018
bibo:pmid	28336367
has license	els-covid
sha1sum (hex)	9b65172474596d39536d018185c4e92a52909622
schema:url	https://doi.org/10.1016/j.jviromet.2017.02.018
resource representing a document's title	New real time and conventional RT-PCRs for updated molecular diagnosis of infectious bronchitis virus infection (IBV) in chickens in Egypt associated with frequent co-infections with avian influenza and Newcastle Disease viruses
has PubMed Central identifier	PMC7113857
has PubMed identifier	28336367
schema:publication	Journal of Virological Methods
resource representing a document's body	covid:9b65172474596d39536d018185c4e92a52909622#body_text
is schema:about of	named entity 'field' named entity 'detrimental' named entity 'samples' named entity 'MOLECULAR DIAGNOSIS' named entity 'EGYPT' named entity 'CHICKENS' named entity 'VIRUSES' named entity 'REAL TIME' named entity 'SCREEN' named entity 'CONVENTIONAL' named entity 'FREQUENT' named entity 'IBV' named entity 'S1 GENE' named entity 'RESTRICTED' named entity 'CHICKENS' named entity 'PRESENCE OF' named entity 'TARGETING' named entity 'DIRECTLY' named entity 'CORONAVIRUS' named entity 'SEQUENCE-BASED TYPING' named entity 'CLINICAL' named entity 'STRAINS' named entity 'CONVENTIONAL' named entity 'CURRENTLY' named entity 'REGIONS' named entity 'CIRCULATING' named entity 'ASSOCIATED WITH' named entity 'NEW' named entity 'INFECTIOUS BRONCHITIS VIRUS' named entity 'VIRUS INFECTION' named entity 'UPDATED' named entity 'CO-INFECTIONS' named entity 'AVIAN INFLUENZA' named entity 'NEWCASTLE DISEASE' named entity 'FIELD' named entity 'USED' named entity 'EFFECTS' named entity 'REAL-TIME RT-PCR' named entity 'POULTRY INDUSTRY' named entity 'NUCLEOCAPSID' named entity 'GENE' named entity 'GENOTYPES' named entity 'SENSITIVE' named entity 'EGYPT' named entity 'SAMPLES' named entity 'EGYPTIAN' named entity 'NUCLEOTIDE SEQUENCE' named entity 'INFECTIOUS BRONCHITIS' named entity 'RT-PCR ASSAY' named entity '1-2' named entity 'Egypt' named entity 'nucleotide' named entity 'gene' named entity 'assay' named entity 'amplifying' named entity 'Conventional' named entity 'IBV' named entity 'IBV' named entity 'RT-PCR' named entity 'IBV' named entity 'gene' named entity 'IBV' named entity 'viruses' named entity 'avian influenza' named entity 'NDV' named entity 'ac.uk' named entity 'Qiagen' named entity 'turkey coronavirus' named entity 'RT-PCR' named entity 'chicken farms' named entity 'amino acid' named entity 'RT-qPCR'

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