About: Adenoviruses Associated with Acute Respiratory Diseases Reported in Beijing from 2011 to 2013

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An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Adenoviruses Associated with Acute Respiratory Diseases Reported in Beijing from 2011 to 2013
Creator	Xu, Wenbo Zhu, Zhen Chen, Meng Zhang, Tiegang Deng, Ying Liu, Donglei Wu, Jiang
Source	Medline; PMC
abstract	BACKGROUND: Adenovirus is one of the most common causes of viral acute respiratory infections. To identify the types of human adenoviruses (HAdVs) causing respiratory illness in Beijing, a sentinel surveillance project on the viral aetiology of acute respiratory infection was initiated in 2011. PRINCIPAL FINDINGS: Through the surveillance project, 4617 cases of respiratory infections were identified during 2011-2013. Throat swabs (pharynx and tonsil secretions) were collected from all the patients, and 15 different respiratory viruses were screened by multiplex one-step PCR method. 45 were identified as adenovirus-positive from sporadic and outbreak cases of respiratory infection by a multiplex one-step RT-PCR method, and a total of 21 adenovirus isolates were obtained. Five HAdV types among three species, including HAdV-3 (species HAdV-B), HAdV-4 (species HAdV-E), HAdV-7 (species HAdV-B), HAdV-55 (species HAdV-B), and an undefined HAdV type (species HAdV-C) were identified. The comparison results of the penton base, hexon, and fiber gene sequences of the Beijing HAdV-3, HAdV-4, HAdV-7, and HAdV-55 strains in this study and those from the GenBank database indicated significant spatial and temporal conservation and stability of sequences within the genome; however, the phylogenetic relationship indicated that both strain BJ04 and strain BJ09 isolated in 2012 and 2013, respectively, may have recombined between HAdV-1 genome and HAdV-2 genome within species HAdV-C, indicating intraspecies recombination. CONCLUSIONS: This study confirmed that at least 5 HAdV types including HAdV-3, HAdV-4, HAdV-7, HAdV-55 and an undefined HAdV type were co-circulating and were the causative agents of respiratory tract infections in recent years in Beijing. HAdV-3, HAdV-4, HAdV-7, and HAdV-55 showed the apparent stability of the genomes, while intraspecies recombination was identified in strain BJ04 and BJ09. The recombinants carrying penton base gene of HAdV-1 as well as hexon and fiber genes of HAdV-2 might be a novel type of HAdV worthy of further study.
has issue date	2015-03-27(xsd:dateTime)
bibo:doi	10.1371/journal.pone.0121375
bibo:pmid	25816320
has license	cc-by
sha1sum (hex)	9ea1a900f1243ce3264700e9eec29b402892674c
schema:url	https://doi.org/10.1371/journal.pone.0121375
resource representing a document's title	Adenoviruses Associated with Acute Respiratory Diseases Reported in Beijing from 2011 to 2013
has PubMed Central identifier	PMC4376766
has PubMed identifier	25816320
schema:publication	PLoS One
resource representing a document's body	covid:9ea1a900f1243ce3264700e9eec29b402892674c#body_text
is schema:about of	named entity 'PROJECT' named entity 'CAUSES' named entity 'SENTINEL SURVEILLANCE' named entity 'BEIJING' named entity 'ADENOVIRUSES' named entity 'VIRAL' named entity 'TYPES' named entity 'ACUTE RESPIRATORY INFECTIONS' named entity 'RESPIRATORY ILLNESS' named entity 'AETIOLOGY' named entity 'Beijing' named entity 'surveillance' named entity 'acute respiratory infection' named entity 'aetiology' named entity '2013' named entity 'Beijing' named entity 'ADENOVIRUSES' named entity 'REPORTED' named entity '2011' named entity 'ONE OF' named entity 'ADENOVIRUS' named entity 'TO IDENTIFY' named entity '2011' named entity 'ACUTE' named entity 'RESPIRATORY DISEASES' named entity 'ASSOCIATED WITH' named entity 'BEIJING' named entity 'COMMON' named entity 'HUMAN' named entity 'ACUTE RESPIRATORY INFECTION' named entity 'CAUSING' covid:arg/9ea1a900f1243ce3264700e9eec29b402892674c named entity 'Adenovirus' named entity 'human' named entity 'Beijing' named entity 'aetiology' named entity 'Respiratory Diseases' named entity 'Beijing' named entity 'GenBank' named entity 'China' named entity 'Adenoviridae' named entity 'Beijing' named entity 'genotype' named entity 'cough' named entity 'human rhinovirus' named entity 'pneumonia' named entity 'recombinant virus' named entity 'International Committee on Taxonomy of Viruses' named entity 'gene delivery' named entity 'PCR' named entity 'Guangzhou' named entity 'HKU1' named entity 'haemagglutination' named entity 'Adenoviruses' named entity 'respiratory tract infection' named entity 'Lanzhou City' named entity 'phylogenetic analysis' named entity 'recombination' named entity 'viruses' named entity 'Sanger sequencing' named entity 'PCR' named entity 'tonsil' named entity 'Hexons' named entity 'bioinformatics' named entity 'China' named entity 'China' named entity 'NL63' named entity 'Egypt' named entity 'acute respiratory infections' named entity 'ICTV' named entity 'PCR' named entity 'human coronavirus' named entity 'inoculate' named entity 'disease prevention and control' named entity 'cough'

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