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About:
Associations of osteopontin and NT-proBNP with circulating miRNA levels in acute coronary syndrome
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research paper
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Academic Article
research paper
schema:ScholarlyArticle
isDefinedBy
Covid-on-the-Web dataset
has title
Associations of osteopontin and NT-proBNP with circulating miRNA levels in acute coronary syndrome
Creator
Armstrong, Paul
Bowsman, Lenden
Chan, Mark
Duffin, Kevin
Fox, Keith
Grass, Elizabeth
Gregory, Simon
Haas, Joseph
Kwee, Lydia
Neely, Megan
Ohman, E.
Roe, Matthew
Shah, Svati
White, Harvey
Source
PMC
abstract
The genomic regulatory networks underlying the pathogenesis of non-ST-segment elevation acute coronary syndrome (NSTE-ACS) are incompletely understood. As intermediate traits, protein biomarkers report on underlying disease severity and prognosis in NSTE-ACS. We hypothesized that integration of dense microRNA (miRNA) profiling with biomarker measurements would highlight potential regulatory pathways that underlie the relationships between prognostic biomarkers, miRNAs, and cardiovascular phenotypes. We performed miRNA sequencing using whole blood from 186 patients from the TRILOGY-ACS trial. Seven circulating prognostic biomarkers were measured: NH(2)-terminal pro-B-type natriuretic peptide (NT-proBNP), high-sensitivity C-reactive protein, osteopontin (OPN), myeloperoxidase, growth differentiation factor 15, monocyte chemoattractant protein, and neopterin. We tested miRNAs for association with each biomarker with generalized linear models and controlled the false discovery rate at 0.05. Ten miRNAs, including known cardiac-related miRNAs 25-3p and 423-3p, were associated with NT-proBNP levels (min. P = 7.5 × 10(−4)) and 48 miRNAs, including cardiac-related miRNAs 378a-3p, 20b-5p and 320a, -b, and -d, were associated with OPN levels (min. P = 1.6 × 10(−6)). NT-proBNP and OPN were also associated with time to cardiovascular death, myocardial infarction (MI), or stroke in the sample. By integrating large-scale miRNA profiling with circulating biomarkers as intermediate traits, we identified associations of known cardiac-related and novel miRNAs with two prognostic biomarkers and identified potential genomic networks regulating these biomarkers. These results, highlighting plausible biological pathways connecting miRNAs with biomarkers and outcomes, may inform future studies seeking to delineate genomic pathways underlying NSTE-ACS outcomes.
has issue date
2019-10-01
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bibo:doi
10.1152/physiolgenomics.00033.2019
bibo:pmid
31530226
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no-cc
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https://doi.org/10.1152/physiolgenomics.00033.2019
resource representing a document's title
Associations of osteopontin and NT-proBNP with circulating miRNA levels in acute coronary syndrome
has PubMed Central identifier
PMC7054637
has PubMed identifier
31530226
schema:publication
Physiol Genomics
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covid:PMC7054637#body_text
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schema:about
of
named entity 'circulating'
named entity 'osteopontin'
named entity 'Indianapolis'
named entity 'miRNAs'
named entity 'Agilent'
named entity 'GWAS'
named entity 'mouse model'
named entity 'serum'
named entity 'clopidogrel'
named entity 'NT-proBNP'
named entity 'biomarkers'
named entity 'Aventis'
named entity 'NT-proBNP'
named entity 'ACS'
named entity 'expression levels'
named entity 'amino acid'
named entity '5.5'
named entity 'mRNA'
named entity 'biological process'
named entity 'biomarker'
named entity 'prion diseases'
named entity 'NT-proBNP'
named entity 'polypeptide'
named entity 'biomarkers'
named entity 'confounder'
named entity 'causality'
named entity 'miRNA'
named entity 'ACS'
named entity 'Sanofi'
named entity 'Statistical analysis'
named entity 'biomarkers'
named entity 'biomarkers'
named entity 'Sanofi'
named entity 'Merck Sharpe & Dohme'
named entity 'carcinogenesis'
named entity 'plasma'
named entity 'cellular processes'
named entity 'miRNAs'
named entity 'technical replicates'
named entity 'FDR'
named entity 'clinical trial'
named entity 'ethanol precipitation'
named entity 'Aligned reads'
named entity 'NT-proBNP'
named entity 'biomarker'
named entity 'biomarkers'
named entity 'prasugrel'
named entity 'phenotypes'
named entity 'microcalcification'
named entity 'immunoassays'
named entity 'exact mechanism'
named entity 'regulate gene expression'
named entity 'Daiichi Sankyo'
named entity 'ICAM-1'
named entity 'unstable angina'
named entity 'Illumina'
named entity 'high-sensitivity C-reactive protein'
named entity 'cardiovascular events'
named entity 'MCP1'
named entity 'ACS'
named entity 'monocyte chemoattractant protein 1'
named entity 'ACS'
named entity 'mRNA'
named entity 'miRNAs'
named entity 'B-type natriuretic peptide'
named entity 'genomic studies'
named entity 'miRNAs'
named entity 'chemoattractant'
named entity 'biological pathways'
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