About: Risk factors for seasonal influenza virus detection in stools of patients consulting in general practice for acute respiratory infections in France, 2014‐2016

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About: Risk factors for seasonal influenza virus detection in stools of patients consulting in general practice for acute respiratory infections in France, 2014‐2016 Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

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type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Risk factors for seasonal influenza virus detection in stools of patients consulting in general practice for acute respiratory infections in France, 2014‐2016
Creator	Charrel, Remi Falchi, Alessandra Hanslik, Thomas Minodier, Laëtitia Ceccaldi, Pierre-Emmanuel Capai, Lisandru Van Der Werf, Sylvie Masse, \| Thierry Blanchon, \|
Source	Medline; PMC
abstract	BACKGROUND: Previous studies reported detection of influenza RNA in stools of patients with seasonal influenza infection. While this detection may have a clinical significance, other factors may influence the stool positivity for influenza viruses. OBJECTIVES: The objective of this study was to investigate demographical, clinical, and microbiological factors which could favor the presence of influenza viral RNA in the stools of patients with laboratory‐confirmed influenza infection. METHODS: Acute respiratory infection (ARI) patients were enrolled by general practitioners (GP) during two winter seasons (2014‐2016). Nasopharyngeal swabs, stool specimens, and clinical data were collected. Samples were tested for 12 respiratory pathogen groups (nasopharyngeal and stool specimens) and for 12 enteric pathogens (stool specimens). RESULTS: Among the 331 patients with ARI enrolled by GP, 114 (34.4%) presented influenza infection. Influenza RNA was detected in stool samples of 21% (24/114) of the 114 stool specimens analyzed. Hospitalization (adjusted odds ratio (aOR) = 7.8 (95% confidence interval (CI)) [1.7‐33.7], P = .02), age between 45 and 64 years (aOR = 4.8 [1.7‐14.5], P = .01), consumption of raw shellfish and/or mollusks (aOR = 16.7 [3.6‐90.9], P = .00), and use of antibiotics (aOR = 6.4 [2.1‐19.8], P = .006) or antiviral treatment (aOR = 7.4 [1.9‐29], P = .01) were significantly associated with an increased odds of the detection of influenza RNA in stools. Among the 24 stool samples subjected to viral isolation, no one showed virus growth. CONCLUSIONS: These findings will be useful to studies investigating the dissemination route of influenza viruses to gastrointestinal tract.
has issue date	2019-05-10(xsd:dateTime)
bibo:doi	10.1111/irv.12523
bibo:pmid	29144593
has license	cc-by
sha1sum (hex)	a2cb05adda0e747ced00f9b34732296d28e3a0b5
schema:url	https://doi.org/10.1111/irv.12523
resource representing a document's title	Risk factors for seasonal influenza virus detection in stools of patients consulting in general practice for acute respiratory infections in France, 2014‐2016
has PubMed Central identifier	PMC6586184
has PubMed identifier	29144593
schema:publication	Influenza Other Respir Viruses
resource representing a document's body	covid:a2cb05adda0e747ced00f9b34732296d28e3a0b5#body_text
is schema:about of	named entity 'influenza' named entity 'aOR' named entity 'specimens' named entity 'samples' named entity 'route' named entity 'samples' named entity 'demographical' named entity 'influenza' named entity 'acute' named entity 'aOR' named entity 'samples' named entity 'influenza' named entity 'Hospitalization' named entity 'studies' named entity 'raw' named entity 'odds' named entity 'Acute respiratory infection' named entity 'nasopharyngeal' named entity 'While' named entity 'factors' named entity 'microbiological' named entity 'stool' named entity 'respiratory infections' named entity '2014-2016' named entity 'influenza' named entity 'infection' named entity 'RNA' named entity 'influenza viruses' named entity 'RNA' named entity '21%' named entity 'demographical' named entity 'seasonal influenza' named entity 'mollusks' named entity 'Nasopharyngeal swabs' named entity '14.5' named entity 'viral RNA' named entity 'nasopharyngeal' named entity 'influenza infection' named entity 'influenza virus' named entity 'drug prescription' named entity 'observational study' named entity 'viral RNA' named entity 'cough' named entity 'pathogens' named entity 'internal control' named entity 'demographical' named entity 'viral RNA' named entity 'drug consumption' named entity 'meta-analysis' named entity 'GI tract' named entity 'tap water' named entity 'antiviral treatment' named entity 'tissue cells' named entity 'allergy' named entity 'upper respiratory tract' named entity 'risk factors' named entity 'lower gastrointestinal tract' named entity 'headache' named entity 'influenza' named entity 'confidence intervals' named entity 'sample size' named entity 'oysters' named entity 'vomiting' named entity 'viral RNA' named entity 'malaise' named entity 'epithelial cells' named entity 'viral RNA' named entity 'viral RNA' named entity 'chronic disease' named entity 'MDCK' named entity 'Patient information' named entity 'feces' named entity 'research project'

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