About: Acquisition of respiratory viruses and presence of respiratory symptoms in French pilgrims during the 2016 Hajj: A prospective cohort study

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About: Acquisition of respiratory viruses and presence of respiratory symptoms in French pilgrims during the 2016 Hajj: A prospective cohort study Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Acquisition of respiratory viruses and presence of respiratory symptoms in French pilgrims during the 2016 Hajj: A prospective cohort study
Creator	Yezli, Saber Raoult, Didier Gautret, Philippe Parola, Philippe Alotaibi, Badriah Dogue, Fabiola Drali, Tassadit Hoang, Van-Thuan Sow, Doudou Pommier De Santi, Vincent
Source	Elsevier; Medline; PMC
abstract	BACKGROUND: Viral respiratory tract infections are frequent among Hajj pilgrims. However, it is still not known whether viruses are responsible for the symptoms observed in sick pilgrims or whether they only colonize sick and asymptomatic pilgrims. PATIENTS AND METHODS: A prospective cohort study was conducted among French Hajj pilgrims in 2016. Medical follow-up and systematic nasal swabbing were performed pre- and post-Hajj. Additional samples were obtained per-Hajj, at symptom onset in ill pilgrims. Viruses were identified using the BioFire FilmArray(®) Respiratory multiplex qualitative PCR panel. RESULTS: 109 pilgrims were included. 83.5% presented respiratory symptoms during Hajj and 39.5% were still symptomatic on return. 5.5% of pre-Hajj, 95.2% of per-Hajj (at symptom onset) and 46.5% of post-Hajj samples tested positive (p < 0.0001). Acquisition rates of rhinovirus/enterovirus, coronavirus 229E and influenza A virus were respectively 38.6%, 19.8% and 2.0%. Although rhinovirus/enterovirus, coronavirus 229E and influenza A clearance were respectively 70.6%, 71.4% and 100% on return, overall virus carriage proportion on return was 75.0% in pilgrims with influenza-like illness and 44.0% in those who have never experienced this symptoms or resolved it (OR = 4.05, 95% CI [1.02–16.02]). CONCLUSIONS: Viruses likely play some role in the pathogenesis of the respiratory tract infections at the Hajj. Point of care-rapid multiplex PCR assays are valuable diagnosis tools in this context when used at respiratory symptom onset or soon after.
has issue date	2019-03-08(xsd:dateTime)
bibo:doi	10.1016/j.tmaid.2019.03.003
bibo:pmid	30858034
has license	no-cc
sha1sum (hex)	c97b37850bdad70d9b424f7f6521ec9f0063e087
schema:url	https://doi.org/10.1016/j.tmaid.2019.03.003
resource representing a document's title	Acquisition of respiratory viruses and presence of respiratory symptoms in French pilgrims during the 2016 Hajj: A prospective cohort study
has PubMed Central identifier	PMC7110710
has PubMed identifier	30858034
schema:publication	Travel Med Infect Dis
resource representing a document's body	covid:c97b37850bdad70d9b424f7f6521ec9f0063e087#body_text
is schema:about of	named entity 'Respiratory' named entity 'Point' named entity 'Viruses' named entity 'onset' named entity 'return' named entity 'pilgrims' named entity 'samples' named entity 'PCR' named entity 'prospective cohort study' named entity 'French' named entity 'FRENCH' named entity 'PRESENCE OF' named entity 'PRE' named entity 'RESPIRATORY SYMPTOM' named entity 'PROPORTION' named entity 'LIKELY' named entity 'RESPIRATORY TRACT INFECTIONS' named entity 'EXPERIENCED' named entity 'RATES' named entity 'USING' named entity 'SAMPLES' named entity 'PANEL' covid:arg/c97b37850bdad70d9b424f7f6521ec9f0063e087 named entity 'PLAY' named entity 'CONTEXT' named entity 'MEDICAL FOLLOW-UP' named entity 'POST' named entity 'RHINOVIRUS' named entity 'OVERALL' named entity 'DIAGNOSIS' named entity 'RESOLVED' named entity 'SYMPTOMS' named entity 'PCR' named entity '5B1' named entity 'OBTAINED' named entity 'SYMPTOM ONSET' named entity 'PATHOGENESIS' named entity 'RESPIRATORY SYMPTOMS' named entity 'POINT OF CARE' named entity 'HAVE' named entity 'RESPIRATORY' named entity 'SOON AFTER' named entity 'RESULTS' named entity 'PROSPECTIVE COHORT STUDY' named entity 'ACQUISITION' named entity 'VIRUS' named entity 'VIRUSES' named entity 'INFLUENZA A VIRUS' named entity 'RESPIRATORY SYMPTOMS' named entity 'CORONAVIRUS 229E' named entity 'RESPIRATORY VIRUSES' named entity 'INFLUENZA-LIKE ILLNESS' named entity '100%' named entity 'SWABBING' named entity 'MULTIPLEX' named entity 'PRESENTED' named entity 'CONCLUSIONS' named entity 'RAPID' named entity 'TOOLS' named entity 'ADDITIONAL' named entity 'NASAL' named entity 'USED' named entity 'INFLUENZA A' named entity 'POSITIVE' named entity 'IDENTIFIED' named entity 'INCLUDED' named entity '5.5' named entity '28P' named entity 'ROLE' named entity 'RETURN' named entity 'TESTED' named entity 'PERFORMED'

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