About: Successive Passage In Vitro Led to Lower Virulence and Higher Titer of A Variant Porcine Epidemic Diarrhea Virus

Facets (new session)
Description
Metadata
Settings
- owl:sameAs
- Inference Rule:

About: Successive Passage In Vitro Led to Lower Virulence and Higher Titer of A Variant Porcine Epidemic Diarrhea Virus Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Successive Passage In Vitro Led to Lower Virulence and Higher Titer of A Variant Porcine Epidemic Diarrhea Virus
Creator	He, Hongbin Guo, Xiaozhen Zhao, Pengwei Wu, Jiaqiang Wang, Song Chen, Zhi Liu, Yueyue Yu, Jiang Xu, Guanlong Li, Jinxiang Zhao, Lu Qiu, Wenbin Tang, Rongzhi
Source	Medline; PMC
abstract	A highly virulent porcine epidemic diarrhea virus (PEDV) appeared in China and spread rapidly to neighbor countries, which have led to great economic losses to the pig industry. In the present study, we isolated a PEDV using Vero cells and serially propagated 100 passages. PEDV SDSX16 was characterized in vitro and in vivo. The viral titers increased to 10(7.6) TCID(50)/mL (100th) by serial passages. The spike (S) gene and the whole gene of the SDSX16 virus was fully sequenced to assess the genetic stability and relatedness to previously identified PEDV. Along with successive passage in vitro, there were 18 nucleotides (nt) deletion occurred in the spike (S) gene resulting in a deletion of six amino acids when the SDSX16 strain was passaged to the 64th generation, and this deletion was stable until the P100. However, the ORF1a/b, M, N, E, and ORF3 genes had only a few point mutations in amino acids and no deletions. According to growth kinetics experiments, the SDSX16 deletion strain significantly enhanced its replication in Vero cells since it was passaged to the 64th generation. The animal studies showed that PEDV SDSX16-P10 caused more severe diarrhea and vomiting, fecal shedding, and acute atrophic enteritis than SDSX16-P75, indicating that SDSX16-P10 is enteropathogenic in the natural host, and the pathogenicity of SDSX16 decreased with successive passage in vitro. However, SDSX16-P10 was found to cause lower levels of cytokine expression than SDSX16-P75 using real-time PCR and flow cytometry, such as IL1β, IL6, IFN-β, TNF-α, indicating that SDSX16-P10 might inhibit the expression of cytokines. Our data indicated that successive passage in vitro resulted in virulent attenuation in vivo of the PEDV variant strain SDSX16.
has issue date	2020-04-01(xsd:dateTime)
bibo:doi	10.3390/v12040391
bibo:pmid	32244640
has license	cc-by
sha1sum (hex)	dc61db3f0571d3a11a3451ebd58997cada9d988a
schema:url	https://doi.org/10.3390/v12040391
resource representing a document's title	Successive Passage In Vitro Led to Lower Virulence and Higher Titer of A Variant Porcine Epidemic Diarrhea Virus
has PubMed Central identifier	PMC7232491
has PubMed identifier	32244640
schema:publication	Viruses
resource representing a document's body	covid:dc61db3f0571d3a11a3451ebd58997cada9d988a#body_text
is schema:about of	named entity 'IL1' named entity 'TNF' named entity 'PATHOGENICITY' covid:arg/dc61db3f0571d3a11a3451ebd58997cada9d988a named entity 'passaged' named entity 'atrophic' named entity 'PEDV' named entity 'porcine epidemic diarrhea virus' named entity 'genetic stability' named entity 'China' named entity 'pathogenicity' named entity 'severe diarrhea' named entity 'nucleotides' named entity 'cytokine' named entity 'point mutations' named entity 'pig' named entity 'PBS' named entity 'pro-inflammatory cytokines' named entity 'reverse transcription' named entity 'cloned' named entity 'IIb' named entity 'TNF-α' named entity 'TNF-α' named entity 'Pro-inflammatory cytokines' named entity 'intestinal epithelial cells' named entity 'intestinal epithelial cells' named entity 'virus' named entity 'hpi' named entity 'OsO4' named entity 'pro-inflammatory cytokines' named entity 'TaKaRa Bio' named entity 'feces' named entity 'antigen' named entity 'monoclonal antibody' named entity 'Statistically significant' named entity 'gene' named entity 'coronaviruses' named entity 'significant difference' named entity 'titer' named entity 'mRNA expression' named entity 'gene' named entity 'type I IFNs' named entity 'cDNA' named entity 'staining' named entity 'P63' named entity 'vomiting' named entity 'monoclonal antibody' named entity 'neighbor-joining method' named entity 'GenBank' named entity 'inoculum' named entity 'statistical significance' named entity 'innate immune response' named entity 'microscope' named entity 'Toll-like receptors' named entity 'diarrhea' named entity 'Figure 8' named entity 'Germany' named entity 'tissue culture' named entity 'Vero' named entity 'Shandong Province' named entity 'Sigma-Aldrich' named entity 'virus replication' named entity 'deletions' named entity 'phosphate-buffered saline' named entity 'pathogenicity' named entity 'Leica' named entity 'IHC' named entity 'villous atrophy' named entity 'virus'

Faceted Search & Find service v1.13.91 as of Mar 24 2020

Alternative Linked Data Documents: Sponger | ODE Content Formats:

RDF

ODATA

Microdata

About

OpenLink Virtuoso version 07.20.3229 as of Jul 10 2020, on Linux (x86_64-pc-linux-gnu), Single-Server Edition (94 GB total memory)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2024 OpenLink Software