About: Characterization of canine coronavirus spread among domestic dogs in Vietnam

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About: Characterization of canine coronavirus spread among domestic dogs in Vietnam Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
has title	Characterization of canine coronavirus spread among domestic dogs in Vietnam
Creator	Maeda, Ken Kuwata, Ryusei Shimoda, Hiroshi Yonemitsu, Kenzo Van Nguyen, Dung Minami, Shohei Dinh, Thanh Le, Ha Nagata, Nao Terada, Yukata
topic	covid:e0875b937adb61d120554efed78760b89fda64b8#this
Source	Medline; PMC
abstract	Canine coronavirus (CCoV) is an important pathogen that causes enteritis in dogs, but there is no information on CCoV infection in Vietnam. To examine the prevalence of CCoV infection among Vietnamese dogs, 201 serum samples were analyzed by virus-neutralization (VN) test. The results showed that antibody against CCoV-II was present in 87 dogs (43.3%). To detect genes of CCoV, fecal samples collected from 30 diarrheic and 50 healthy dogs were examinated by RT-PCR, confirming that 2 diarrheic dogs and 5 healthy dogs were positive for CCoV. Nucleotide sequences of N-terminal region of spike (S) gene indicated that CCoV strains were divided into two subgenotypes, CCoV-IIa and -IIb, respectively. Furthemore, we succeeded in isolating CCoV/dog/HCM47/2015, the isolate was plaque-purified three times, and 3’-terminal one-third of the genome was analyzed. Interestingly, the plaque-purified virus had a large deletion in ORF3abc and E genes (1,165 nt), and a short deletion in ORF7b gene (60 nt), suggesting that these regions are not necessary for in vitro replication of CCoV. Next, the antigenicity between the isolated CCoV-IIb and the other CCoV-IIa was compared by VN test, revealing that antigenicty of the isolated CCoV is equal or higher than that of the other CCoV. In summary, two subgenotypes of CCoV-II are spreading among Vietnamese dogs. The isolated virus with a large deletion after in vitro passage may be useful for the development of vaccine, owing to its antigenicity and efficient viral growth in vitro.
has issue date	2016-11-14(xsd:dateTime)
bibo:doi	10.1292/jvms.16-0538
bibo:pmid	27840394
has license	cc-by-nc-nd
sha1sum (hex)	e0875b937adb61d120554efed78760b89fda64b8
schema:url	https://doi.org/10.1292/jvms.16-0538
resource representing a document's title	Characterization of canine coronavirus spread among domestic dogs in Vietnam
has PubMed Central identifier	PMC5326940
has PubMed identifier	27840394
schema:publication	J Vet Med Sci
resource representing a document's body	covid:e0875b937adb61d120554efed78760b89fda64b8#body_text
is http://vocab.deri.ie/void#inDataset of	https://covidontheweb.inria.fr:4443/about/id/http/ns.inria.fr/covid19/e0875b937adb61d120554efed78760b89fda64b8
is schema:about of	named entity 'SPREAD' named entity 'EFFICIENT' named entity 'ENTERITIS' named entity 'SPREADING' named entity 'CAUSES' named entity 'IMPORTANT' named entity '28S' named entity 'ISOLATED' named entity 'DOGS' named entity 'ANTIBODY' named entity 'THESE' named entity 'TIMES' named entity '2860' named entity 'VIETNAM' named entity 'ORF7B' named entity 'SAMPLES' named entity 'ANALYZED' named entity 'SPIKE' named entity 'VIETNAMESE' named entity 'CONFIRMING' named entity 'PREVALENCE' named entity 'ISOLATE' named entity 'PLAQUE' named entity 'COMPARED' named entity 'VACCINE' named entity 'USEFUL' named entity 'SERUM' named entity 'times' named entity 'higher' named entity 'terminal' named entity '2015' named entity 'pathogen' named entity 'test' named entity 'canine coronavirus' covid:arg/e0875b937adb61d120554efed78760b89fda64b8 named entity 'TO EXAMINE' named entity 'PRESENT' named entity 'INDICATED' named entity 'RT-PCR' named entity 'TO DETECT' named entity 'LARGE' named entity 'TERMINAL' named entity 'N-TERMINAL ' named entity 'VIRAL' named entity 'COLLECTED' named entity 'IIA' named entity 'HEALTHY' named entity 'DEVELOPMENT' named entity 'RESULTS' named entity 'INFECTION' named entity 'NUCLEOTIDE SEQUENCES' named entity 'CANINE CORONAVIRUS' named entity 'VIETNAM' named entity 'DOMESTIC' named entity 'CHARACTERIZATION' named entity 'DOG' named entity 'GENE' named entity 'VIRUS' named entity 'REGION' named entity 'PASSAGE' named entity 'EQUAL' named entity 'NECESSARY' named entity 'HIGHER' named entity 'IN VITRO' named entity 'MAY BE' named entity 'NEUTRALIZATION ' named entity 'PURIFIED' named entity 'REVEALING' named entity 'ITS' named entity 'PATHOGEN'

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