About: Herd‐level prevalence and incidence of porcine epidemic diarrhoea virus (PEDV) and porcine deltacoronavirus (PDCoV) in swine herds in Ontario, Canada

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About: Herd‐level prevalence and incidence of porcine epidemic diarrhoea virus (PEDV) and porcine deltacoronavirus (PDCoV) in swine herds in Ontario, Canada Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
title	Herd‐level prevalence and incidence of porcine epidemic diarrhoea virus (PEDV) and porcine deltacoronavirus (PDCoV) in swine herds in Ontario, Canada
Creator	Ajayi, T Dara, \| Misener, \| Moser, \| Pasma, \| Poljak, \|
source	Medline; PMC
abstract	Porcine epidemic diarrhoea virus (PEDV) and porcine deltacoronavirus (PDCoV) were first identified in Canada in 2014. Surveillance efforts have been instrumental in controlling both diseases. In this study, we provide an overview of surveillance components for the two diseases in Ontario (Canada), as well as PEDV and PDCoV incidence and prevalence measures. Swine herds located in the Province of Ontario, of any type, whose owners agreed to participate in a voluntary industry‐led disease control programme (DCP) and with associated diagnostic or epidemiological information about the two swine coronaviruses, were eligible to be included for calculation of disease frequency at the provincial level. PEDV and PDCoV data stored in the industry DCP database were imported into the R statistical software and analysed to produce weekly frequency of incidence counts and prevalence counts, in addition to yearly herd‐level incidence risk and prevalence between 2014 and 2016. The yearly herd‐level incidence risk of PEDV, based on industry data, was 13.5%, 3.0% and 1.4% (95% CI: 11.1–16.2, 2.0–4.2, 0.8–2.3), while the yearly herd‐level incidence risk of PDCoV was 1.1%, 0.3%, and 0.1% (95% CI: 0.5–2.2, 0.1–0.9, 0.0–0.5), for 2014, 2015 and 2016, respectively. Herd‐level prevalence estimates for PEDV in the last week of 2014, 2015 and 2016 were 4.4%, 2.3% and 1.4%, respectively (95% CI: 3.1–6.0, 1.5–3.3, 0.8–2.2), while herd‐level prevalence estimates for PDCoV in the last week of 2014, 2015 and 2016 were 0.5%, 0.2% and 0.2%, respectively (95% CI: 0.1–1.2, 0.0–0.6, 0.0–0.6). Collectively, our results point to low and decreasing incidence risk and prevalence for PEDV and PDCoV in Ontario, making both diseases possible candidates for disease elimination at the provincial level.
has issue date	2018-04-01(xsd:dateTime)
bibo:doi	10.1111/tbed.12858
bibo:pmid	29607611
has license	no-cc
sha1sum (hex)	f9898c959e124f7234179de547c5f35d39456336
schema:url	https://doi.org/10.1111/tbed.12858
resource representing a document's title	Herd‐level prevalence and incidence of porcine epidemic diarrhoea virus (PEDV) and porcine deltacoronavirus (PDCoV) in swine herds in Ontario, Canada
has PubMed Central identifier	PMC7169835
has PubMed identifier	29607611
schema:publication	Transbound Emerg Dis
resource representing a document's body	covid:f9898c959e124f7234179de547c5f35d39456336#body_text
is schema:about of	named entity 'disease surveillance' named entity 'incidence' named entity 'located' named entity 'prevalence' named entity 'porcine' named entity 'deltacoronavirus' named entity 'incidence' named entity '2014' named entity 'controlling' named entity 'prevalence' named entity '2014' named entity 'prevalence' named entity 'Surveillance' named entity 'prevalence' named entity 'incidence' named entity 'analysed' named entity 'data' named entity 'participate' named entity 'making' named entity '95% CI' named entity 'database' named entity '2016' named entity 'industry' named entity 'based' named entity 'addition' named entity 'prevalence' named entity 'database' named entity 'virus' named entity '95% CI' named entity 'Ontario' named entity 'Province of Ontario' named entity '95% CI' named entity 'industry data' named entity 'Ontario' named entity 'virus' named entity 'PEDV' named entity 'mortality rate' named entity 'vomiting' named entity 'disease monitoring' named entity 'faecal-oral route' named entity 'coronaviruses' named entity 'veterinarians' named entity 'porcine' named entity 'Swiffer' named entity 'porcine epidemic diarrhoea' named entity 'infection status' named entity 'diarrhoea' named entity 'virus' named entity 'farrowing crates' named entity 'PEDV' named entity 'TGEV' named entity 'porcine reproductive and respiratory syndrome virus' named entity 'PEDV' named entity 'Ontario' named entity 'United States' named entity 'porcine' named entity 'PEDV' named entity 'long-term' named entity 'virus' named entity 'time series' named entity 'viruses' named entity 'fomites' named entity 'PEDV' named entity 'disease control' named entity 'diagnostic testing' named entity 'PEDV' named entity 'Ontario' named entity 'PED' named entity 'diagnostic testing' named entity 'virus' named entity 'transportation vehicles' named entity 'AHL' named entity 'PEDV' named entity 'PEDV' named entity 'faecal-oral route' named entity 'PEDV'

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