About: cross-linking immunoprecipitation high-throughput sequencing assay

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An Entity of Type : owl:Class, within Data Space : wasabi.inria.fr associated with source document(s)

Attributes	Values
type	Class
label	cross-linking immunoprecipitation high-throughput sequencing assay
subClassOf	sequencing assay analyte assay nodeID://b665191721 nodeID://b665191730 nodeID://b665191743 nodeID://b665191744 nodeID://b665191745 nodeID://b665191746 nodeID://b665191750 nodeID://b665191751 nodeID://b665216018 nodeID://b665216027 nodeID://b665216040 nodeID://b665216041 nodeID://b665216042 nodeID://b665216043 nodeID://b665216047 nodeID://b665216048 nodeID://b665814540 nodeID://b665814549 nodeID://b665814562 nodeID://b665814563 nodeID://b665814564 nodeID://b665814565 nodeID://b665814569 nodeID://b665814570 nodeID://b665838837 nodeID://b665838846 nodeID://b665838859 nodeID://b665838860 nodeID://b665838861 nodeID://b665838862 nodeID://b665838866 nodeID://b665838867 nodeID://b665871052 nodeID://b665871061 nodeID://b665871074 nodeID://b665871075 nodeID://b665871076 nodeID://b665871077 nodeID://b665871081 nodeID://b665871082 nodeID://b665895349 nodeID://b665895358 nodeID://b665895371 nodeID://b665895372 nodeID://b665895373 nodeID://b665895374 nodeID://b665895378 nodeID://b665895379 nodeID://b665919646 nodeID://b665919655 nodeID://b665919668 nodeID://b665919669 nodeID://b665919670 nodeID://b665919671 nodeID://b665919675 nodeID://b665919676 nodeID://b665943943 nodeID://b665943952 nodeID://b665943965 nodeID://b665943966 nodeID://b665943967 nodeID://b665943968 nodeID://b665943972 nodeID://b665943973
described by	proxy:entity/http/purl.obolibrary.org/obo/obi.owl
term editor	Jie Zheng Chris Stoeckert Venkat Malladi
example of usage	Heulga et al. Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins. Cell Rep. 2012 Feb 23;1(2):167-78. [PMID:22574288]
definition	An analyte assay that employs UV-crosslinking between RNA and a protein, followed by immunoprecipitation with antibodies for the protein, fragmentation, and high-throughput screening for RNA sequences that interact with a particular RNA-binding protein.
definition source	PMID:18978773
alternative label	CLIP-seq HITS-CLIP CLIP-seq assay
editor preferred term	cross-linking immunoprecipitation high-throughput sequencing assay
has curation status	metadata complete
is subClassOf of	individual-nucleotide resolution cross-linking and immunoprecipitation sequencing assay
is topic of	Ontology for Biomedical Investigations

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