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n2:topic_0594

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owl:Class

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Sequence classification

rdfs:comment

Methods including sequence motifs, profile and other diagnostic elements which (typically) represent conserved patterns (of residues or properties) in molecular sequences.

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owl:DeprecatedClass

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n2:operation_3501 n2:operation_3936 n2:operation_3259 n2:operation_3440 n2:operation_0224 n2:operation_0525 n2:format_3827 n2:data_2146 n2:data_2925 n2:data_1278 n2:data_1465 n2:data_0582 n2:operation_3182 n2:format_3158 n2:topic_3385 n2:topic_0220 n2:topic_3376 n2:operation_2929 n2:data_0005 n2:operation_2944 n2:operation_3441 n2:operation_0482 n2:operation_3215 n2:format_3579 n2:format_3843 n2:topic_0741 n2:format_1631 n2:topic_3041 n2:format_3596 n2:topic_0607 n2:data_1249 n2:data_1384 n2:data_2978 n2:format_3817 n2:topic_1307 n2:format_2000 n2:data_1147 n2:format_1930 n2:format_3999 n2:data_0914 n2:operation_3907 n2:topic_2869 n2:topic_3377 n2:data_1426 n2:data_1868 n2:operation_0417 n2:data_1277 n2:format_1217 n2:data_0893 obo:hasNarrowSynonym obo:hasAlternativeId obo:consider obo:ObsoleteClass n2:operation_0479 n2:data_3241 n2:data_1361 n2:data_2831 n2:operation_3803 n2:data_2855 n2:topic_0641 n2:data_1026 n2:format_3000 n17:Version n2:data_1355 n2:topic_3042 n2:data_3498 n2:operation_3223 n2:operation_3742 n2:operation_3933 n2:format_3698 n2:format_3708 n2:data_1025 n2:format_3986 n2:topic_1305 n2:topic_3125 n2:format_1982 n2:operation_0294 n2:data_2292 n2:operation_4008 n2:format_3549 n2:operation_0256 n2:topic_3489 n2:topic_3676 n2:operation_2426 n2:operation_3545 n2:data_1285 n2:data_2012 n2:format_3607 n2:format_3327 n2:operation_3459 n2:topic_0621 n2:topic_0798 n2:topic_0218 n2:topic_0222 n2:topic_0175 n2:operation_0477 n2:operation_3680 n2:operation_0306 n2:operation_0362 n2:data_3137

wdrs:describedby

n9:data_0883 n7:operation_0298 n9:has_topic n9:data_2977 n7:format_3602 n7:has_function n7:operation_2426 n7:data_3275 n7:topic_3407 n7:topic_3423 n7:operation_0479 n7:operation_2995 n7:topic_3384 n7:data_3861 n7:format_3626 n7:data_1916 n7:topic_3372 n9:format_3014 n7:topic_0083 n7:has_topic n9:has_function n7:operation_2485 n7:operation_2930 n7:data_3036 n7:operation_3658 n9:data_2972 n7:topic_3299 n7:created_in n7:operation_0297 n7:format_3014 n7:data_2977 n7:topic_0154 n7:operation_3900 n9:topic_0605 n9:format_3547 n7:data_0006 n9:operation_3927 n7:operation_3429 n7:data_3028 n7:data_3724 n7:data_1426 n7:topic_0114 n7:operation_2575 n7:operation_3631 n7:operation_0238 n7:operation_0308 n7:operation_2502 n7:operation_3545 n7:operation_3431 n7:data_2865 n7:format_3607 n7:data_0872 n7:data_0945 n7:data_1285 n7:topic_0121 n7:operation_2441 n7:operation_0004 n7:data_2972 n7:topic_2818 n9:data_2092 n9:format_3602 n7:format_1915 n7:format_2331 n7:data_2081 n7:topic_0173 n7:topic_3042 n7:data_0889 n7:data_1877 n9:data_3028 n9:operation_2409 n9:topic_3042 n7:is_topic_of n7:data_3483 n7:operation_2439 n9:topic_3573 n7:topic_3346 n7:data_2100 n7:format_2097 n7:format_1209 n7:format_3749 n7:data_0971 n7:operation_3927 n7:topic_3050 n7:data_2044 n7:data_3869 n7:operation_3891 n9:topic_0083 n9:operation_2499 n7:operation_2480 n7:topic_0085 n7:operation_0314 n7:operation_0291 n7:topic_3344 n7:data_3718 n7:topic_0089 n7:data_3479 n7:data_3495 n7:data_1691 n7:data_2190 n7:data_1255 n7:data_1355 n7:topic_3474 n7:data_1261 n7:data_0968 n9:format_2331 n9:format_3007 n9:data_2156 n7:data_2600 n7:topic_2269 n7:data_0007 n9:topic_2230 n7:topic_3489 n9:topic_0783 n9:operation_0398 n7:operation_2421 n7:topic_0003 n7:data_1365 n7:data_2012 n7:data_0897 n7:data_1354 n7:data_0842 n7:data_2156 n7:operation_0292 n7:data_3035 n9:format_3462 n7:topic_3077 n7:topic_3676 n7:data_1274 n7:data_2082 n7:format_3508 n7:data_0970 n9:topic_3123 n9:format_1212 n7:data_2927 n7:data_2162 n9:topic_3322 n7:operation_3200 n7:operation_3840 n7:topic_2533 n7:data_3108 n7:topic_2399 n7:data_0581 n7:data_2048 n7:data_2180 n7:data_1017

owl:deprecated

true true

obo:inSubset

n14:obsolete n2:obsolete

n2:created_in

beta12orEarlier

n2:obsolete_since

1.12

n2:oldParent

owl:Thing

obo:hasDefinition

The classification of molecular sequences based on some measure of their similarity.

obo:replacedBy

n2:topic_0080

Subject Item

_:vb665998611

rdf:type

owl:Axiom

rdfs:comment

Is defined anywhere? Not in the 'unknown' version of RO. 'OBO_REL:bearer_of' is narrower in the sense that it only relates ontological categories (concepts) that are an 'independent_continuant' (snap:IndependentContinuant) with ontological categories that are a 'specifically_dependent_continuant' (snap:SpecificallyDependentContinuant), and broader in the sense that it relates with any borne objects not just functions of the subject.

wdrs:describedby

n7:topic_0594 n9:topic_0594

owl:annotatedProperty

obo:hasRelatedSynonym

owl:annotatedSource

n2:has_function

owl:annotatedTarget

OBO_REL:bearer_of

Subject Item

_:vb665998612

rdf:type

owl:Axiom

rdfs:comment

In very unusual cases.

wdrs:describedby

n7:topic_0594 n9:topic_0594

owl:annotatedProperty

obo:isCyclic

owl:annotatedSource

n2:has_function

owl:annotatedTarget

true

Subject Item

_:vb665998613

rdf:type

owl:Axiom

rdfs:comment

'OBO_REL:has_participant' is narrower in the sense that it only relates ontological categories (concepts) that are a 'process' (span:Process) with ontological categories that are a 'continuant' (snap:Continuant), and broader in the sense that it relates with any participating objects not just inputs or input arguments of the subject.

wdrs:describedby

n7:topic_0594 n9:topic_0594

owl:annotatedProperty

obo:hasRelatedSynonym

owl:annotatedSource

n2:has_input

owl:annotatedTarget

OBO_REL:has_participant

Subject Item

_:vb665998614

rdf:type

owl:Axiom

rdfs:comment

In very unusual cases.

wdrs:describedby

n7:topic_0594 n9:topic_0594

owl:annotatedProperty

obo:isCyclic

owl:annotatedSource

n2:has_input

owl:annotatedTarget

true

Subject Item

_:vb665998615

rdf:type

owl:Axiom

rdfs:comment

'OBO_REL:has_participant' is narrower in the sense that it only relates ontological categories (concepts) that are a 'process' (span:Process) with ontological categories that are a 'continuant' (snap:Continuant), and broader in the sense that it relates with any participating objects not just outputs or output arguments of the subject. It is also not clear whether an output (result) actually participates in the process that generates it.

wdrs:describedby

n7:topic_0594 n9:topic_0594

owl:annotatedProperty

obo:hasRelatedSynonym

owl:annotatedSource

n2:has_output

owl:annotatedTarget

OBO_REL:has_participant

Subject Item

_:vb665998616

rdf:type

owl:Axiom

rdfs:comment

In very unusual cases.

wdrs:describedby

n7:topic_0594 n9:topic_0594

owl:annotatedProperty

obo:isCyclic

owl:annotatedSource

n2:has_output

owl:annotatedTarget

true

Subject Item

_:vb665998617

rdf:type

owl:Class

owl:unionOf

_:vb665998619

wdrs:describedby

n7:topic_0594 n9:topic_0594

Subject Item

_:vb665998618

rdf:first

n2:operation_0004

rdf:rest

rdf:nil

wdrs:describedby

n7:topic_0594 n9:topic_0594

Subject Item

_:vb665998619

rdf:first

n2:data_0006

rdf:rest

_:vb665998618

wdrs:describedby

n7:topic_0594 n9:topic_0594

Subject Item

_:vb665998620

rdf:type

owl:Axiom

rdfs:comment

In very unusual cases.

wdrs:describedby

n7:topic_0594 n9:topic_0594

owl:annotatedProperty

obo:isCyclic

owl:annotatedSource

n2:has_topic

owl:annotatedTarget

true

Subject Item

_:vb665998621

rdf:type

owl:Axiom

rdfs:comment

Is defined anywhere? Not in the 'unknown' version of RO. 'OBO_REL:quality_of' might be seen narrower in the sense that it only relates subjects that are a 'quality' (snap:Quality) with objects that are an 'independent_continuant' (snap:IndependentContinuant), and is broader in the sense that it relates any qualities of the object.

wdrs:describedby

n7:topic_0594 n9:topic_0594

owl:annotatedProperty

obo:hasRelatedSynonym

owl:annotatedSource

n2:is_format_of

owl:annotatedTarget

OBO_REL:quality_of

Subject Item

_:vb665998622

rdf:type

owl:Axiom

rdfs:comment

Is defined anywhere? Not in the 'unknown' version of RO. 'OBO_REL:function_of' only relates subjects that are a 'function' (snap:Function) with objects that are an 'independent_continuant' (snap:IndependentContinuant), so for example no processes. It does not define explicitly that the subject is a function of the object.

wdrs:describedby

n7:topic_0594 n9:topic_0594

owl:annotatedProperty

obo:hasNarrowSynonym

owl:annotatedSource

n2:is_function_of

owl:annotatedTarget

OBO_REL:function_of

Subject Item

_:vb665998623

rdf:type

owl:Axiom

rdfs:comment

Is defined anywhere? Not in the 'unknown' version of RO. 'OBO_REL:inheres_in' is narrower in the sense that it only relates ontological categories (concepts) that are a 'specifically_dependent_continuant' (snap:SpecificallyDependentContinuant) with ontological categories that are an 'independent_continuant' (snap:IndependentContinuant), and broader in the sense that it relates any borne subjects not just functions.

wdrs:describedby

n7:topic_0594 n9:topic_0594

owl:annotatedProperty

obo:hasRelatedSynonym

owl:annotatedSource

n2:is_function_of

owl:annotatedTarget

OBO_REL:inheres_in

Subject Item

_:vb665998624

rdf:type

owl:Axiom

rdfs:comment

In very unusual cases.

wdrs:describedby

n7:topic_0594 n9:topic_0594

owl:annotatedProperty

obo:isCyclic

owl:annotatedSource

n2:is_function_of

owl:annotatedTarget

true

Subject Item

_:vb665998625

rdf:type

owl:Axiom

rdfs:comment

'OBO_REL:participates_in' is narrower in the sense that it only relates ontological categories (concepts) that are a 'continuant' (snap:Continuant) with ontological categories that are a 'process' (span:Process), and broader in the sense that it relates any participating subjects not just inputs or input arguments.

wdrs:describedby

n7:topic_0594 n9:topic_0594

owl:annotatedProperty

obo:hasRelatedSynonym

owl:annotatedSource

n2:is_input_of

owl:annotatedTarget

OBO_REL:participates_in

Subject Item

_:vb665998626

rdf:type

owl:Axiom

rdfs:comment

In very unusual cases.

wdrs:describedby

n7:topic_0594 n9:topic_0594

owl:annotatedProperty

obo:isCyclic

owl:annotatedSource

n2:is_input_of

owl:annotatedTarget

true

Subject Item

_:vb665998627

rdf:type

owl:Axiom

rdfs:comment

'OBO_REL:participates_in' is narrower in the sense that it only relates ontological categories (concepts) that are a 'continuant' (snap:Continuant) with ontological categories that are a 'process' (span:Process), and broader in the sense that it relates any participating subjects not just outputs or output arguments. It is also not clear whether an output (result) actually participates in the process that generates it.

wdrs:describedby

n7:topic_0594 n9:topic_0594

owl:annotatedProperty

obo:hasRelatedSynonym

owl:annotatedSource

n2:is_output_of

owl:annotatedTarget

OBO_REL:participates_in

Subject Item

_:vb665998628

rdf:type

owl:Axiom

rdfs:comment

In very unusual cases.

wdrs:describedby

n7:topic_0594 n9:topic_0594

owl:annotatedProperty

obo:isCyclic

owl:annotatedSource

n2:is_output_of

owl:annotatedTarget

true

Subject Item

_:vb665998629

rdf:type

owl:Class

owl:unionOf

_:vb665998631

wdrs:describedby

n7:topic_0594 n9:topic_0594